Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_835.1_17877
Locus scaffold835.1 : 207730 ... 222445 : +
To GenomeBrowser scaffold835.1:207730..222445
Genes list of scaffold scaffold835.1
Synonym pfu_aug1.0_8768.1_38819

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_835.1_17877.t1 1 1 Glyco_transf_10 169 463 0.0 201.6 0.0 0.0 201.1

Transcript
Transcript IDpfu_aug2.0_835.1_17877.t1
Definition-
>pfu_aug2.0_835.1_17877.t1
atgcaacaaactgaagttataccacttatcgtccatatatcaccaacttccaaattctgcaaagaagaaacgcgaatccc
aaatggagatgagaccaagaacccgtggagagtaagcatctcctgtttgtcagcaacaaccaacacttatgccgtgcaga
tatcaccaacttccaaattctgcaaagaagaaacgcgaatcccaaatggagatgagaccaagaacccgtggagagtaagc
atctcctgtttgtcagcaacaaccaacacttatgccgtgcaggtttgtcatcctactacatcagcgatgaacaatgttga
cttaatcaagatattgtttgtcttcaccattatcttcgtatcattcatgttaaccatgtggttcaaatctggaccgacct
atgtgataccaattttaaaggagcacaaactaattcccggtccgttccggtatgaatgcaaagacggagcagctaatcca
agaaatttacatactgatatcaaaaagatttgcacgggaacgggaagtatttggaaaaccataaattttgatacgtgttc
ggtaaaaggttgtatccttgaggataatctgaccaaatctcacgaatgccatgctgtaatgcttcaaaccaatcatttag
aggacagattcatccctcgccaagatgaacaggtctggattcttgtatcacatgaaacaccattcactttgactccaatt
ttaggcaataaaaaatggagaggggcttttaattggattttttcatatcagaaaaactccgatatattttttccatgggg
acgagtcattaagaagaaccaaatacaaaagaaaaattacagcgctatttttgactcaaagaacggaacagcagtatggt
tttctagcaactgtcaaacccaaagcaaacgggaagaatatgttaatataaagcaaagggtaatcgaaatagacatctac
ggaaagtgtgggaatttatcatgcaaaaatattataaacctagtcgacccgaaagatgagtgccgaaccgagaagagtat
gcaatacaaattttacttatctttcgaaaacgcactctgccctgcatatatgacggagaaattgttcttgttttatcagt
acgatcgtcaaataatcccagtggtcagaggagttcagaatgcagaggaaattctaccgaataacacttacgttgatgct
agtaagttcgataacgcaacacaactagctcattacctgaaagagcttggaaacgacagggaaagatacatagccatgtt
agaggaaaaagataaatatacagtagaatcccttgctgatgttttcgaatccgctttgtgttctctatgcgaaaaactcc
acaattcctttaatcaacgatgcatcgacactaagatatggatgaaacagagtttcgaagaatgcagggagcctgatgat
ctcatgtga

Protein
Protein IDpfu_aug2.0_835.1_17877.t1
Definition-
>pfu_aug2.0_835.1_17877.t1
MQQTEVIPLIVHISPTSKFCKEETRIPNGDETKNPWRVSISCLSATTNTYAVQISPTSKFCKEETRIPNGDETKNPWRVS
ISCLSATTNTYAVQVCHPTTSAMNNVDLIKILFVFTIIFVSFMLTMWFKSGPTYVIPILKEHKLIPGPFRYECKDGAANP
RNLHTDIKKICTGTGSIWKTINFDTCSVKGCILEDNLTKSHECHAVMLQTNHLEDRFIPRQDEQVWILVSHETPFTLTPI
LGNKKWRGAFNWIFSYQKNSDIFFPWGRVIKKNQIQKKNYSAIFDSKNGTAVWFSSNCQTQSKREEYVNIKQRVIEIDIY
GKCGNLSCKNIINLVDPKDECRTEKSMQYKFYLSFENALCPAYMTEKLFLFYQYDRQIIPVVRGVQNAEEILPNNTYVDA
SKFDNATQLAHYLKELGNDRERYIAMLEEKDKYTVESLADVFESALCSLCEKLHNSFNQRCIDTKIWMKQSFEECREPDD
LM

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495