Gene
| Gene Model ID | pfu_aug2.0_837.1_24451 |
|---|---|
| Locus | scaffold837.1 : 37203 ... 61505 : - |
| To GenomeBrowser | scaffold837.1:37203..61505 |
| Genes list of scaffold | scaffold837.1 |
| Synonym | pfu_aug1.0_1268.1_58423 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peroxisomal membrane protein pmp34-like | GO:0000295 GO:0005346 GO:0005778 GO:0008514 GO:0015211 GO:0015711 GO:0015858 GO:0015868 GO:0016021 GO:0051182 GO:0051184 GO:0051503 GO:0098656 GO:1901679 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_837.1_24451.t1 | 3 | 1 | Mito_carr | 903 | 987 | 0.0 | 199.0 | 3.8e-21 | 1.4e-17 | 63.1 |
| pfu_aug2.0_837.1_24451.t1 | 3 | 2 | Mito_carr | 993 | 1093 | 0.0 | 199.0 | 1.3e-23 | 5.0e-20 | 71.0 |
| pfu_aug2.0_837.1_24451.t1 | 3 | 3 | Mito_carr | 1102 | 1189 | 0.0 | 199.0 | 3.6e-21 | 1.3e-17 | 63.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_837.1_24451.t1 | gi|524898666|ref|XP_005105779.1| | PREDICTED: peroxisomal membrane protein PMP34-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_837.1_24451.t1 | gi|260824615|ref|XP_002607263.1| | hypothetical protein BRAFLDRAFT_125172 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_837.1_24451.t1 | gi|676480544|ref|XP_009062094.1| | hypothetical protein LOTGIDRAFT_183558 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_837.1_24451.t1 | gi|291241258|ref|XP_002740530.1| | PREDICTED: peroxisomal membrane protein PMP34-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_837.1_24451.t1 | gi|597758583|ref|XP_007240994.1| | PREDICTED: peroxisomal membrane protein PMP34-like [Astyanax mexicanus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_837.1_24451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_837.1_24451.t1 atgacaagaaatgaaattttcccgccatccaaggacatgcttgcaaaacttatagcaaaactgtttgatccagatgccaa aacacgtaaaataggcggatcaagaaaaatgtgctacctggatttagtcgaaaatgatatgaaaactacaggtacccagc agttcagtgtaccggaatactgtaaaatatcattgaatgataaaatggaaattactgtgtcttgtccatcagaactaaca gtcaactgtaagcccctagagataattgcaacatttggaagttcgaatttaatcataaaagtacatgagaaatgcatctc taccatacctgtatttgtcacacaggacaccgtaaacggaattatctcattattgtgcaaacttaaggtatgtactggaa agccattgactgaaggcacaactctaaagagaggaacgaatgaagtgtgggggaccatcttagacaccacaaagaaagaa gagaggattcgtacacatgcttgtgcaggtcttgtacctatcatatcaaacaatgaatattgtaaaccttgccactgtgc acaccgctctgtcttaaaacggaaaagtgataatatacctgaacctgaacctgagcctgagcctgagcctgaaataccga tatcttcaacttcggaaaaatccaagaaagatctaattgaacagctgctacctcagggttctccaccatacctacatctt ttattagaacaacaaattcataattcaaatagtgaattggatatccaccgtagacgatgggacccacaggttataagttt tagtcttagtattttcaatacatcacctcaatcttatgaaaatctgaccaaatctggattcctgtgtcttccttcagttt caactctatcgaagtacaaaaactctgtgcggcaagccccagggattcaaactgaaaatctccattggatgaaaacggag gcagagagactacaaatcagtgactttggacggcgaggtggtctactaattgatgagatgcatattcaagatgaccttca ggttaaaaggaagggtgatgcttgggaaatcataggtatggaggatatgggaagcacaaacaacaacatcaccatcatta aggataaaaaagttacatgcaagctagcgaaacaggccttgcaatttatgtttcacggattttcggggtttagatggcca gttgcctactatggatcgatatcagccacagctcagcagctacaagtaattgtgatggattgtttggatgctttggacga gattgggttcaaaattgactatataatgtttgatggtgcttctgcgaatcgcacacttaccaacattctactccataaca agcctcgtgaatctgattatgtgtttgcagatccctttgacgccaatcataaaatatgcatcattcaagactgcatgcat ctgctgaaaaaaattcggaatagtatggaggcaagtaaagaagtacataaagcagcacctgggaggtacttgattctcga tgggaaggcaattgtctgggaccactttattcaagcctttgagttcaatcaacaaggagccttcagaatacacaggcgct tgacaaaagaacatatctacctgactagcgagtccaaaatgcgaaaccgcttggcaactgatgtcttgaatcaagaaatg ttatacctaatgcaggcataccagaaaacaattccggaccctgaccaccttaattcgaccattcaacttttggagcagac atctgtactagtaaatttcttcactgacaccagacccattctatcaaacaacgacgatcggctgaagcagctcgaaagtg tactacagttcttcgactcctgggaaacacaagtggaaatatcacccttgtaccaatcgacaaaacatttaattaccaga gaaaccagagaagacttacactccaccatatctggatttatttccctttgtaaaattgacataaaaaatggacatacaat cacaccagcatacatcaattcggacgtaatagaaaacttgttctgtcaacaaaggggaattagaaatggaaacaacacaa accccaccctactccaatacggaccatcaaacaattctatcatcctcggacaaaatacagtatcacgaaagtcaaacgcc aagcaaatgccaacatttcacaccgtgaaacgaccgaaaacattacataatcctcctcctcctcctcctcctcctcctcc tcctcctcatcatcatcatcatcatcatcatcatcaccaccattaccaacatccaccaccaccgtcatcatcatcaccac cattaccaacatccaccaccaccgtcatcatcatcaccaccaccgccgccgccgtcgtcatcctcctcctcctccttctc ctcgtcgtcgtcgtcataattcacagagaaaaatcatcatcatcatcatcatcatcatcatcaccatcatcatcatcatc atcatcatcatcatcatcatcatcatcaccaccaccaccctcctcctgctcttcgtcgtcgtcgtcgtcgtcggtagtca acagagaaaaaatatttgaagtccgggatcgaagttacgataacgtcgcacctgtcaagacgatgtcgaaatcgaaagtt gttttgtcgcaagcctcgagcaaaatgatacacgttgaccgactggaacagctgttctcgtataaaaacctgatacatgc catttcaggagctacgggtagtgtgattgccatggctgttttctatccccttgatacagctagaacaagattacaagttg atgacaagaggcaagctaaatcaactcactttgtcatagctgaacttattaaagatgaaggagtgacatcactatacaga ggactgttccctgtgttagtcaccttgtgctgctcaaactttgtgtacttttacacttataatggtatgaaaactacatt gcttggacctacatcaaaacctagcccagcgaaagacatgctgtttgcatttgttgctggctgtgtgaatgtgatcctaa caactccattatgggttgtcaatacacgactaaagctacagggagctaagttttataccagcaagcacaatgatgcaaaa cttccaaaatacaaaggcattctggatgctttgctgaaaatacgacgtcatgaaggcatttgctcgctatggaatggtac cttcccgtctctgattcttactgccaatccatctatccaattcatggtgtatgaaactgttaaaagatacttccagcagc ttttaaaaacaaaggagctgagcggtttcctgtactttatcatcggtgctatagcaaagactgtctctacaatagtcact tatcctctacaaattgtacagtcacgtctcaggactggtcttcacaagcacacagaatcaaaaaatctaattcagagttt aagagacttaataagagctgatggattcaagggactgtacaaaggtatggaggccaaacttctacaaactgtcctcatgt cagctttcatgttcctcacttacgaaaaaattgcagcatttatatttcacatgttcggtataagtaaggagtag |
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Protein
| Protein ID | pfu_aug2.0_837.1_24451.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_837.1_24451.t1 MTRNEIFPPSKDMLAKLIAKLFDPDAKTRKIGGSRKMCYLDLVENDMKTTGTQQFSVPEYCKISLNDKMEITVSCPSELT VNCKPLEIIATFGSSNLIIKVHEKCISTIPVFVTQDTVNGIISLLCKLKVCTGKPLTEGTTLKRGTNEVWGTILDTTKKE ERIRTHACAGLVPIISNNEYCKPCHCAHRSVLKRKSDNIPEPEPEPEPEPEIPISSTSEKSKKDLIEQLLPQGSPPYLHL LLEQQIHNSNSELDIHRRRWDPQVISFSLSIFNTSPQSYENLTKSGFLCLPSVSTLSKYKNSVRQAPGIQTENLHWMKTE AERLQISDFGRRGGLLIDEMHIQDDLQVKRKGDAWEIIGMEDMGSTNNNITIIKDKKVTCKLAKQALQFMFHGFSGFRWP VAYYGSISATAQQLQVIVMDCLDALDEIGFKIDYIMFDGASANRTLTNILLHNKPRESDYVFADPFDANHKICIIQDCMH LLKKIRNSMEASKEVHKAAPGRYLILDGKAIVWDHFIQAFEFNQQGAFRIHRRLTKEHIYLTSESKMRNRLATDVLNQEM LYLMQAYQKTIPDPDHLNSTIQLLEQTSVLVNFFTDTRPILSNNDDRLKQLESVLQFFDSWETQVEISPLYQSTKHLITR ETREDLHSTISGFISLCKIDIKNGHTITPAYINSDVIENLFCQQRGIRNGNNTNPTLLQYGPSNNSIILGQNTVSRKSNA KQMPTFHTVKRPKTLHNPPPPPPPPPPPPHHHHHHHHHHHHYQHPPPPSSSSPPLPTSTTTVIIITTTAAAVVILLLLLL LVVVVIIHREKSSSSSSSSSSPSSSSSSSSSSSSSSPPPPSSCSSSSSSSSVVNREKIFEVRDRSYDNVAPVKTMSKSKV VLSQASSKMIHVDRLEQLFSYKNLIHAISGATGSVIAMAVFYPLDTARTRLQVDDKRQAKSTHFVIAELIKDEGVTSLYR GLFPVLVTLCCSNFVYFYTYNGMKTTLLGPTSKPSPAKDMLFAFVAGCVNVILTTPLWVVNTRLKLQGAKFYTSKHNDAK LPKYKGILDALLKIRRHEGICSLWNGTFPSLILTANPSIQFMVYETVKRYFQQLLKTKELSGFLYFIIGAIAKTVSTIVT YPLQIVQSRLRTGLHKHTESKNLIQSLRDLIRADGFKGLYKGMEAKLLQTVLMSAFMFLTYEKIAAFIFHMFGISKE |
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