Gene
| Gene Model ID | pfu_aug2.0_837.1_24452 |
|---|---|
| Locus | scaffold837.1 : 126710 ... 135015 : - |
| To GenomeBrowser | scaffold837.1:126710..135015 |
| Genes list of scaffold | scaffold837.1 |
| Synonym | pfu_aug1.0_5195.1_09068 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_837.1_24452.t1 | 2 | 1 | Exo_endo_phos_2 | 149 | 259 | 6.7e-06 | 25.7 | 1.1e-08 | 3.2e-05 | 23.5 |
| pfu_aug2.0_837.1_24452.t1 | 1 | 1 | Plant_tran | 607 | 774 | 2.3e-09 | 36.9 | 1.4e-10 | 4.2e-07 | 29.5 |
| pfu_aug2.0_837.1_24452.t1 | 1 | 1 | DDE_Tnp_4 | 616 | 766 | 1.3e-34 | 119.1 | 8.1e-38 | 2.4e-34 | 118.2 |
| pfu_aug2.0_837.1_24452.t1 | 2 | 2 | Exo_endo_phos_2 | 629 | 667 | 6.7e-06 | 25.7 | 0.69 | 2100.0 | -1.7 |
Transcript
| Transcript ID | pfu_aug2.0_837.1_24452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_837.1_24452.t1 atgagaccccctaagcgcgctttgctggcaccaataaatatcttgcttcttgcattgtcatctgatattgaactcaaccc gggcccaggtagccaacattaccaatgcggtagttcagatagagatgatgatatgggcatccagtgtgatggttgtatgg taaacaaaaaagatcagcttcactcagttattgatatagaagatccagatatagtagtcgggactgagtcctggctctca ccatctatctatgacagtgaaatatttccaccctatctgaattacacagtctatagaagagatcgccaaaccaaaacaac tggtgatggcatatttatcctggttagaaacaccctcatatcaaatcttaaaccccaatacaacaccaactgtgaaaatc tatgggttgaagttaaagtgcgaggcacaaagccccttatcattggagcatactataagcacaaagagctagatcatgaa agtatgtttgaactgaagtcatccctagattgcatactgcaatctgataaatactccaacatccctctatcaggtgactt taatttaccttcaatgaactcgaatgacgaaacaacaattcctggttgtaaaaatcagccatactatgagcagtttttaa caatcacgaaagactgcaatctcactcaggttataaataaacctaccagaggagaaaacatcctagatttgattttcaca acaaatattacacttgtgcatgactctgatgtaatccctggtatcagtgaccatgatattgcctgtttagtggtaagtat taagcccgatatcaacaggcaacagcccagaaaaatcttactctataaaagagcagactgggatggttttcgtgagtata tgcgcacatacagtgataggttttgttcaaggaaccacagtcacagtgatgtagatgacatatggtctgaattcacccaa accttagataagggaacatcaaagttcatcccaagagacatcctaggtatctccaccaaaccaggtaacattcagagcaa acctgacaccaagaagctcttcactctcctcaaactctctaaacaggattccctgagcattccacccttacaatctggag gtaagacattcacagataccgtagagaaatccaacattttaaacggccagtttcagtctgtcttttcacctacacatccc ctctccttacagcagttgtgccataagtatatacaagaccacgttgactcgggtatgttaccagattccagtataccttt caaaacaagttcatatccatctatgccaagctttaccattggctcagaaggtatttatatactgctcaagtctttccagc caaacaaagcagccgggccagataagatcagccccataatactcagagagctgcgaaatgaaatctgcaacatcatccag gtaatttgtactaaatcacttaatacaggcaaactaccatctcagtggctagacgctaacataagtcctatatataagaa aggggacagaagcctgccaagcaacactcacctgtgtactctgcaagattggagataccttactcaacgacttgctgatg ctaggcttgttatgctcttcaagatcctgcatggcttagtggcagttcaagcccagtcctacataccccaacctacccgc tcttcacaaggaccccgtccacacgccctacctcaaattcaaacctcaagagattattgtaaatacagtttcttccccct cacaattgttcaatggaatgctctcccgccaaccatcccagcaaacctgactctgaaaagcaacttcccaggtgttgttg gatgcgtcgatggcagtcatattgcaattaaagcaccaaatgaacatgcagagacatatgtaaatcgcaaagggtaccat tctttcattcgtcaagcagtgtgcagagaagatcttagattcattcactgtgttgcaggatggccaggaagctgtcataa tgcgcgcgtcttaaagaactctgatttgtgggacacgggcttggtaaaatgtggcgatggacacttagttggagatgcag cctatccaataagaaaatggctcatgacccctttccgcgataacggtcaccttataccagcgcagcgaagattcaacaat tcactatccacagtaagggtaacaattgaacgtgcatttggcttactgaaaggtcgttttcgtagactgcaactactaga aacaatgaatgttgaaacagcagtgtatattatattagcttgttgtgttatgcttaacatctgcattttaaatgaggatg aggttgaagatttcatggtagaagaccataaccaaccgccccctcatccaaatccaaatttgcatgaaacaaaagagggg atctccaacaacaccaggttgcagcacccacagcaaaaccccaaaacactcaatgcaaaaacacaaagcagacgagcaca gaaagagacgcataagggacaaggaacgtcaacgcacaacacagaaacatcaaacacaaaggactacacataa |
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Protein
| Protein ID | pfu_aug2.0_837.1_24452.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_837.1_24452.t1 MRPPKRALLAPINILLLALSSDIELNPGPGSQHYQCGSSDRDDDMGIQCDGCMVNKKDQLHSVIDIEDPDIVVGTESWLS PSIYDSEIFPPYLNYTVYRRDRQTKTTGDGIFILVRNTLISNLKPQYNTNCENLWVEVKVRGTKPLIIGAYYKHKELDHE SMFELKSSLDCILQSDKYSNIPLSGDFNLPSMNSNDETTIPGCKNQPYYEQFLTITKDCNLTQVINKPTRGENILDLIFT TNITLVHDSDVIPGISDHDIACLVVSIKPDINRQQPRKILLYKRADWDGFREYMRTYSDRFCSRNHSHSDVDDIWSEFTQ TLDKGTSKFIPRDILGISTKPGNIQSKPDTKKLFTLLKLSKQDSLSIPPLQSGGKTFTDTVEKSNILNGQFQSVFSPTHP LSLQQLCHKYIQDHVDSGMLPDSSIPFKTSSYPSMPSFTIGSEGIYILLKSFQPNKAAGPDKISPIILRELRNEICNIIQ VICTKSLNTGKLPSQWLDANISPIYKKGDRSLPSNTHLCTLQDWRYLTQRLADARLVMLFKILHGLVAVQAQSYIPQPTR SSQGPRPHALPQIQTSRDYCKYSFFPLTIVQWNALPPTIPANLTLKSNFPGVVGCVDGSHIAIKAPNEHAETYVNRKGYH SFIRQAVCREDLRFIHCVAGWPGSCHNARVLKNSDLWDTGLVKCGDGHLVGDAAYPIRKWLMTPFRDNGHLIPAQRRFNN SLSTVRVTIERAFGLLKGRFRRLQLLETMNVETAVYIILACCVMLNICILNEDEVEDFMVEDHNQPPPHPNPNLHETKEG ISNNTRLQHPQQNPKTLNAKTQSRRAQKETHKGQGTSTHNTETSNTKDYT |
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