Gene
| Gene Model ID | pfu_aug2.0_841.1_04620 |
|---|---|
| Locus | scaffold841.1 : 116234 ... 133705 : - |
| To GenomeBrowser | scaffold841.1:116234..133705 |
| Genes list of scaffold | scaffold841.1 |
| Synonym | pfu_aug1.0_35838.1_62836 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_841.1_04620.t1 | 1 | 1 | HLH | 11 | 58 | 2.9e-11 | 42.8 | 7.9e-15 | 5.8e-11 | 41.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_841.1_04620.t1 | gi|156357078|ref|XP_001624051.1| | predicted protein [Nematostella vectensis] | 1.0e-31 |
| pfu_aug2.0_841.1_04620.t1 | gi|676426616|ref|XP_009044680.1| | hypothetical protein LOTGIDRAFT_170608 [Lottia gigantea] | 5.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_841.1_04620.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_841.1_04620.t1 atgaaaaatgcagtaaaaggaacagacaaaagaaacgcaagggagaggaagagagtaaaagggatcaatgagatgttgac tattctcaagcaaaaacttccagaagaatggaccagtagaaaaatgagcaagctggaaattctgaggaagtcggcgctgt atattcggcgactaagtcagatgacgcagacggaaacacaaaacgaagatttggcgtcaagcacatgtgcggcaacaaca acatcatcatcgacaccaatagcagcagacacagcctcaggaaaccagacgatccagtcagtgcagacgacatctttgaa agatgcaatggaattaacatttgacaaggttggaagtccaactacggtagctgaaaacccagtagcacggttaagttact accttcattgcgttgactcggttctagatctggagcatattccaaatataaatacgttgcaaaattacagggaatactgc aacctaagcaaggaagagatcgatgacatcgtcagatactgtaatgattatagaccagagtatatggagggccgatgctt tttcctacttcctgaaaaatgcggtgattcaggaaacaaattctacgagcgcgaggatacaacaaccgtcgttggtgcag cacaagtggatctcccgaatgcagccgctagcgtaacaatagctacccgggatgtaaaggtaacaagtcttatgacttat aaagaaacttggatgcaaaaaaattatcacgatccaatgaaaaagcttcaaccatggttgagagcatatcagtcgaactc tgaacgacctgtctggcaatgcagggtgaaggctcctccaaaaagcccatttcctgagagcgatgaccccttctcggaga atattgtagcaaatcttctgataagctacttgtttccgttatggatatttggatggatcgctatgtcaataatggcaaca agagataaacatacttctagaaagagaaaggcagaagatgttccaccaaaaagtgaaatttgtatattacactacgatca atcaaaatgtgacaatttcacagatttatcaaaggggaaagatccacatgaaagactaagaagacttcatgaataccgag atctcagattatctcaaccttctgggtctcttgaacgaatggaatcgagaggtactatattcgattcctttggaaatgct gatgaactcagatgtccaccaactgcagactacctttcaaacattgcagaggtggttccggtacagctgaattcttttct cggccaaattctctctgggaaacataaaggaacatctgctaagacagatagaacagtttcctctattggccaagatatat gtagggcagtcacaaatggggaatggaaattaccaaagcatatatttgtagcaattactttacgtcacatgtttcgaagt aaacaactaatgacattattaaacagattaggtcattgtgagagtcattcgttttctgttgagcttgaaactgctttagc aaaagcgactgatgaaacttcgtcatatctcactagccaaatcgtacgaaatcctacagtaccgtttctgtttcattcgg agtttgataactttgaccagcttgtaagcacaatgaaaggcagtggatcagtgcatactgcgcatggaattatgatggaa gaaatactggcagattactcagatcatggtgggagtgttccagatgtacaacaaacacctagaagtaaggaacgctctct gaatctcccagcacaggatgccttgcctgactgttttgtgggtcagagaaagagtccaccatatcaagtgtttaggagag tatatcctggcacagatcaatcattagagactgctacaaacaaggacatcatttggctattcctccgacagttaagatcc ccgcacgacaggaggtttctagttggactggttttgtatcagttactggaagtgtacccaaatagttga |
|
Protein
| Protein ID | pfu_aug2.0_841.1_04620.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_841.1_04620.t1 MKNAVKGTDKRNARERKRVKGINEMLTILKQKLPEEWTSRKMSKLEILRKSALYIRRLSQMTQTETQNEDLASSTCAATT TSSSTPIAADTASGNQTIQSVQTTSLKDAMELTFDKVGSPTTVAENPVARLSYYLHCVDSVLDLEHIPNINTLQNYREYC NLSKEEIDDIVRYCNDYRPEYMEGRCFFLLPEKCGDSGNKFYEREDTTTVVGAAQVDLPNAAASVTIATRDVKVTSLMTY KETWMQKNYHDPMKKLQPWLRAYQSNSERPVWQCRVKAPPKSPFPESDDPFSENIVANLLISYLFPLWIFGWIAMSIMAT RDKHTSRKRKAEDVPPKSEICILHYDQSKCDNFTDLSKGKDPHERLRRLHEYRDLRLSQPSGSLERMESRGTIFDSFGNA DELRCPPTADYLSNIAEVVPVQLNSFLGQILSGKHKGTSAKTDRTVSSIGQDICRAVTNGEWKLPKHIFVAITLRHMFRS KQLMTLLNRLGHCESHSFSVELETALAKATDETSSYLTSQIVRNPTVPFLFHSEFDNFDQLVSTMKGSGSVHTAHGIMME EILADYSDHGGSVPDVQQTPRSKERSLNLPAQDALPDCFVGQRKSPPYQVFRRVYPGTDQSLETATNKDIIWLFLRQLRS PHDRRFLVGLVLYQLLEVYPNS |
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