Gene
| Gene Model ID | pfu_aug2.0_841.1_04622 |
|---|---|
| Locus | scaffold841.1 : 221839 ... 254353 : + |
| To GenomeBrowser | scaffold841.1:221839..254353 |
| Genes list of scaffold | scaffold841.1 |
| Synonym | pfu_aug1.0_18694.1_47243 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal protein s6 kinase alpha-1 isoform x2 | GO:0000166 GO:0004672 GO:0007165 GO:0016310 GO:0043167 GO:0044267 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_841.1_04622.t1 | 3 | 1 | Pkinase | 58 | 317 | 0.0 | 375.8 | 0.0 | 0.0 | 237.0 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 1 | Pkinase_Tyr | 59 | 300 | 0.0 | 203.3 | 4.2039e-44 | 7.80005e-41 | 139.8 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 1 | Kinase-like | 170 | 273 | 8.9e-11 | 41.2 | 5.2e-11 | 9.6e-08 | 31.3 |
| pfu_aug2.0_841.1_04622.t1 | 1 | 1 | Pkinase_C | 342 | 380 | 3.8e-07 | 30.5 | 5.4e-10 | 1.0e-06 | 29.1 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 2 | Pkinase | 416 | 475 | 0.0 | 375.8 | 2.6e-12 | 4.7e-09 | 35.7 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 2 | Pkinase_Tyr | 417 | 475 | 0.0 | 203.3 | 5.8e-05 | 0.11 | 11.5 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 2 | Kinase-like | 418 | 457 | 8.9e-11 | 41.2 | 0.17 | 320.0 | 0.0 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 3 | Pkinase_Tyr | 473 | 563 | 0.0 | 203.3 | 1.1e-16 | 2.0e-13 | 50.0 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 3 | Pkinase | 474 | 601 | 0.0 | 375.8 | 1.9e-32 | 3.5e-29 | 101.7 |
| pfu_aug2.0_841.1_04622.t1 | 3 | 3 | Kinase-like | 531 | 560 | 8.9e-11 | 41.2 | 0.0037 | 6.8 | 5.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_841.1_04622.t1 | gi|524876138|ref|XP_005094788.1| | PREDICTED: ribosomal protein S6 kinase alpha-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_841.1_04622.t1 | gi|524876140|ref|XP_005094789.1| | PREDICTED: ribosomal protein S6 kinase alpha-1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_841.1_04622.t1 | gi|676487606|ref|XP_009064351.1| | hypothetical protein LOTGIDRAFT_236015 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_841.1_04622.t1 | gi|591380659|ref|XP_007064871.1| | PREDICTED: ribosomal protein S6 kinase 2 alpha-like [Chelonia mydas] | 0.0 |
| pfu_aug2.0_841.1_04622.t1 | gi|530625067|ref|XP_005302082.1| | PREDICTED: ribosomal protein S6 kinase alpha-1 isoform X5 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_841.1_04622.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_841.1_04622.t1 atgcctttggcgcaactctcagatccatggatgcgtttggatctggcccaggagagcgaggctgggtccacggaggatat gctggtagatgaacagggggataatgacaatggaagagagatcaatgtcatcagtatcacaaaagatggagagaaagtcg aacctaaggactttgaattattaaaggttctaggacaagggtcatttggaaaggtttttctcgtcaggaaaatctcggga aaagatggcgggtcactttatgctatgaaggtcttgaagaaagcaacactgaaagtccgggatcgccagcgaacaaagat ggagagggacattctagctgacgttaatcatccgttcattgtcaaattgcattatgcttttcaaacagaggggaagttat acctgatccttggctttctgagaggaggtgacttgttcactagattatctaaagaggtgatgttcacggaagaggatgta aagttttacctagcagagttggcactagctctagatcatcttcattcactaggtatcgtgtacagagatctgaaaccaga aaatatattattagaccatgaggggcatataaagctcacagactttggtcttagtaaggaatcaatctttgaggagaaga agacgtattcgttctgcggaactgttgagtacatggccccagaggtcgtcaaccgtaaaggtcacagtacagcagctgat tggtggtcgtttggggttctcatgtttgaaatgttgacaggatcactgccatttcaaggtgcaaacaggaaggagacaat gacacaaatattaaaggcaaagttaggaatgccacctttcttgagtcctgaggcacaaacacttctaagagcattattca aaagaaatccacttaataggctaggttcaggagctaacggtattgaggacataaagaagcagccgttctttgctacgata gacttcgataagctttataaacgacagactaacccaccgtttaaacccgctgttgtccaaactgacgatgcattttactt tgatgaagaatttaccaggagaacaccaagagattcccctggaattccaccgagtgccaccgctcatgagttgttccgag gattcagttttgtagctcccgctctgttagaacaagggaataatggaaccgtcacaaatcctatcatggataacaatcta aaaaatttacctggagtaaaaagtaaacctttttcagaagaatatgatatgaaggaggatattggaataggatcttattc agtatgtaaaagatgtatgcataaaacaacaagtcagagctttgcagtaaagattatggagaaagagaagcgagatccct cggaggaagttgaaatattgctcagatttggacaccatcctaacataatatcactcagagacgttgtacatagagatctt aagccttccaacattctgtatgcagataactcgggttcacctgatagtttacgaatttgtgactttgggttcgccaaaca gctacgagcggaaaacggtctcttgatgactccatgttatacagctaactttgttgctcctgaggtgctgaaaagacaag gttatgatgcagcctgtgatatttggagtttaggggtacttctttatactatgttagctggccacaccccttttgcaaat ggtcctaacgacacacccaatgatattctgtcccgtatcggggagggcaaatttacactggcaggaggcaactgggactc tgtctcggcagcagctaagggagctatgacagctactttcaaagccctgaacaattcaccaaagccgaccctcgaacccg tgggtgcctcaggacttgcccaacggagagctaatacattgaggttctcggactaa |
|
Protein
| Protein ID | pfu_aug2.0_841.1_04622.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_841.1_04622.t1 MPLAQLSDPWMRLDLAQESEAGSTEDMLVDEQGDNDNGREINVISITKDGEKVEPKDFELLKVLGQGSFGKVFLVRKISG KDGGSLYAMKVLKKATLKVRDRQRTKMERDILADVNHPFIVKLHYAFQTEGKLYLILGFLRGGDLFTRLSKEVMFTEEDV KFYLAELALALDHLHSLGIVYRDLKPENILLDHEGHIKLTDFGLSKESIFEEKKTYSFCGTVEYMAPEVVNRKGHSTAAD WWSFGVLMFEMLTGSLPFQGANRKETMTQILKAKLGMPPFLSPEAQTLLRALFKRNPLNRLGSGANGIEDIKKQPFFATI DFDKLYKRQTNPPFKPAVVQTDDAFYFDEEFTRRTPRDSPGIPPSATAHELFRGFSFVAPALLEQGNNGTVTNPIMDNNL KNLPGVKSKPFSEEYDMKEDIGIGSYSVCKRCMHKTTSQSFAVKIMEKEKRDPSEEVEILLRFGHHPNIISLRDVVHRDL KPSNILYADNSGSPDSLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDAACDIWSLGVLLYTMLAGHTPFAN GPNDTPNDILSRIGEGKFTLAGGNWDSVSAAAKGAMTATFKALNNSPKPTLEPVGASGLAQRRANTLRFSD |
|