Gene
| Gene Model ID | pfu_aug2.0_842.1_07945 |
|---|---|
| Locus | scaffold842.1 : 176600 ... 187108 : + |
| To GenomeBrowser | scaffold842.1:176600..187108 |
| Genes list of scaffold | scaffold842.1 |
| Synonym | pfu_aug1.0_13918.1_54015 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_842.1_07945.t1 | 3 | 1 | I-set | 28 | 113 | 5.3e-28 | 96.7 | 0.00014 | 0.29 | 11.0 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 1 | V-set | 29 | 125 | 8.7e-11 | 41.7 | 0.00033 | 0.7 | 9.8 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 1 | Ig_2 | 31 | 128 | 1.4e-24 | 85.9 | 9.7e-05 | 0.21 | 11.7 |
| pfu_aug2.0_842.1_07945.t1 | 4 | 1 | Ig_3 | 38 | 66 | 1.5e-12 | 47.8 | 0.23 | 490.0 | 1.3 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 1 | ig | 79 | 112 | 4.1e-15 | 55.6 | 0.019 | 40.0 | 4.4 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 2 | I-set | 139 | 219 | 5.3e-28 | 96.7 | 1.0e-14 | 2.2e-11 | 43.4 |
| pfu_aug2.0_842.1_07945.t1 | 4 | 2 | Ig_3 | 139 | 206 | 1.5e-12 | 47.8 | 3.0e-10 | 6.4e-07 | 29.7 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 2 | Ig_2 | 140 | 219 | 1.4e-24 | 85.9 | 2.4e-13 | 5.0e-10 | 39.3 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 2 | ig | 148 | 204 | 4.1e-15 | 55.6 | 7.9e-07 | 0.0017 | 18.4 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 2 | V-set | 183 | 206 | 8.7e-11 | 41.7 | 0.015 | 31.0 | 4.4 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 3 | I-set | 236 | 319 | 5.3e-28 | 96.7 | 7.3e-13 | 1.6e-09 | 37.5 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 3 | V-set | 236 | 313 | 8.7e-11 | 41.7 | 1.4e-07 | 0.0003 | 20.6 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 3 | Ig_2 | 252 | 315 | 1.4e-24 | 85.9 | 9.4e-11 | 2.0e-07 | 31.0 |
| pfu_aug2.0_842.1_07945.t1 | 4 | 3 | Ig_3 | 254 | 307 | 1.5e-12 | 47.8 | 0.0001 | 0.21 | 12.1 |
| pfu_aug2.0_842.1_07945.t1 | 3 | 3 | ig | 255 | 304 | 4.1e-15 | 55.6 | 7.1e-10 | 1.5e-06 | 28.2 |
| pfu_aug2.0_842.1_07945.t1 | 4 | 4 | Ig_3 | 327 | 343 | 1.5e-12 | 47.8 | 7.0 | 15000.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_842.1_07945.t1 | gi|524889607|ref|XP_005101358.1| | PREDICTED: protein amalgam-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_842.1_07945.t1 | gi|676472664|ref|XP_009059563.1| | hypothetical protein LOTGIDRAFT_96129, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_842.1_07945.t1 | gi|675885576|ref|XP_009028290.1| | hypothetical protein HELRODRAFT_194010 [Helobdella robusta] | 9.99995e-41 |
| pfu_aug2.0_842.1_07945.t1 | gi|512925142|ref|XP_004930766.1| | PREDICTED: lachesin [Bombyx mori] | 3.0e-36 |
| pfu_aug2.0_842.1_07945.t1 | gi|383865563|ref|XP_003708242.1| | PREDICTED: lachesin [Megachile rotundata] | 6.0e-36 |
Transcript
| Transcript ID | pfu_aug2.0_842.1_07945.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_842.1_07945.t1 atgaacgttctgctcagcattgatccaactgttactatacaggagactgaccctcccaccagaataacacctctgggtgt gaaggaaatggtggtagtcaaaagtagcgacgcctacctaacttgtgtcgtacataataaacaacaagacagaaacgtcg aatggattgggatggtagatgatctactgggaattgtccccgcaattccgatttccgtcggagccgagtccaaggatccc tacaagtaccaaatggacgttccctcggcattagcgtggcgtcttaaagtccagaatatacagactagtgacgagatgag gtttagatgtcaggtgttgattggaaaccagaagtacgcctttgatgaaagagtcattagggttaccactgcacctcaaa ttgatgacctccgtacaagcagtgatatatccgtaacagtgggagatcctgttgagctgaggtgcaatgcaacgggtcgt cctttccctatagtcaaatgggaaaaactggctggaggcctcctccctactggaggaagggagcacagggattatgtatt ggatctgggtactgcaagaccagaacatcgaggtcaatataagtgcacagctgaaaatgaacaaggaaaggcacaaaggc tggtttctctcactgttaaatttgcccctgtgggacagcctttcgagagaacccctgaacaggctataggctataaaaag gacctgctgtgtgtatttgaggcctatcctatcccaaccaaagaacaagtccagtggtacaaaaacggaaatgttataac gacgggcggaaattttgaaacaacatacatagagggcgcttcagacagaataacgatgaggctgacgataaaccgagttc aacaggagaattacggatattatgaatgcctagcttctaattcggagggatcaggaaaaactaacattgagctgaaacca tcaagcgtacctactccagatctgacgggaagaataagcggagcgggaatgttgactttcagccttaccactgtgctcat gttacttggcgtctgcttcctccattttctgtga |
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Protein
| Protein ID | pfu_aug2.0_842.1_07945.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_842.1_07945.t1 MNVLLSIDPTVTIQETDPPTRITPLGVKEMVVVKSSDAYLTCVVHNKQQDRNVEWIGMVDDLLGIVPAIPISVGAESKDP YKYQMDVPSALAWRLKVQNIQTSDEMRFRCQVLIGNQKYAFDERVIRVTTAPQIDDLRTSSDISVTVGDPVELRCNATGR PFPIVKWEKLAGGLLPTGGREHRDYVLDLGTARPEHRGQYKCTAENEQGKAQRLVSLTVKFAPVGQPFERTPEQAIGYKK DLLCVFEAYPIPTKEQVQWYKNGNVITTGGNFETTYIEGASDRITMRLTINRVQQENYGYYECLASNSEGSGKTNIELKP SSVPTPDLTGRISGAGMLTFSLTTVLMLLGVCFLHFL |
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