Gene
| Gene Model ID | pfu_aug2.0_842.1_07947 |
|---|---|
| Locus | scaffold842.1 : 196980 ... 201891 : + |
| To GenomeBrowser | scaffold842.1:196980..201891 |
| Genes list of scaffold | scaffold842.1 |
| Synonym | pfu_aug1.0_24427.1_26164 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_842.1_07947.t1 | 1 | 1 | OTU | 273 | 372 | 2.8e-17 | 63.4 | 1.4e-20 | 5.0e-17 | 62.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_842.1_07947.t1 | gi|676469718|ref|XP_009058623.1| | hypothetical protein LOTGIDRAFT_163820 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_842.1_07947.t1 | gi|169855277|ref|XP_001834306.1| | hypothetical protein CC1G_11715 [Coprinopsis cinerea okayama7#130] | 6.0e-16 |
| pfu_aug2.0_842.1_07947.t1 | gi|675190131|ref|XP_008903950.1| | hypothetical protein PPTG_09912 [Phytophthora parasitica INRA-310] | 2.0e-14 |
| pfu_aug2.0_842.1_07947.t1 | gi|743808484|ref|XP_010928352.1| | PREDICTED: OTU domain-containing protein 3 isoform X1 [Elaeis guineensis] | 4.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_842.1_07947.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_842.1_07947.t1 atgaggttacaggggatgctttttgagccagcagtgcctccaatcttcagtggatttccgtttacacaattccctccata cgtccctggtgatcgtagcagtcacaatgcacggcagatgttcccaaggagaaatttccatagtaatatagcgtcgcatg atagcaacgatacgatgcaaggtatcccagatagtttctgggagcctgtctctgaagaggaaatatctctaatgagaaac ccagctggataccatcgtgatagtcaatgttatgagattcctatgtcaggacattacggtcacacacagaatgatggtag aactcgcattgttcctatagagatagacggagaggaatatatcaatataagcgatgatgaagattgttgcattgtaccat taggtagagaacgggaaaatgtgaacaataacggaaaatctctgaggaatcgcgaagtggatacagatcagcctgattta aggaccgggggaaaacgttcaactccgagtaaagacaaaattagattatctagtgaaaaatgctttgagatcgacacttc aaaaagaacgaagaatggaaaatcagtgactcctattttgaagacgcaacaatcatcagggtctaaacctttattcgatt ctaaagaggaagaagttcaatttaatgagctaattaagttcttcagtgacgatccaagtgatcaatcggattcaacctca agaagtgcgagtgattttgagacgccaccaagttatccggcctataatgtaatacgtaaaataatctcggatgagggcag agttatagactacgtgaaaggagatggaaattgcttcttccgagccttgagtaagataatttatggctcagaatcaagtc atgaacagctgcggcaagcagtcgtggatttcgtggagaaatatccgcgacattttgagctatatgtggatggaggtact ttacaggaccacattatttgcatgcgtgagaatggagcctggggtactcagctagagatttacgcagcagctacgctact gcagcgagatatttacgtcttgtctccggaccactcaggaaaaaattaccgatggttgcttttcacgcctcgcttctcct accctgaagccaacacatatgatcgatgttacataacactgtgtcatacaaacgggaaccattacgacagaattgcgtca aagaccggttcgtgtaactgtggtcgggaagcaccggtacttagtggcatacagacggaggtggacctcacagaacatat ccctgaagtagtttga |
|
Protein
| Protein ID | pfu_aug2.0_842.1_07947.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_842.1_07947.t1 MRLQGMLFEPAVPPIFSGFPFTQFPPYVPGDRSSHNARQMFPRRNFHSNIASHDSNDTMQGIPDSFWEPVSEEEISLMRN PAGYHRDSQCYEIPMSGHYGHTQNDGRTRIVPIEIDGEEYINISDDEDCCIVPLGRERENVNNNGKSLRNREVDTDQPDL RTGGKRSTPSKDKIRLSSEKCFEIDTSKRTKNGKSVTPILKTQQSSGSKPLFDSKEEEVQFNELIKFFSDDPSDQSDSTS RSASDFETPPSYPAYNVIRKIISDEGRVIDYVKGDGNCFFRALSKIIYGSESSHEQLRQAVVDFVEKYPRHFELYVDGGT LQDHIICMRENGAWGTQLEIYAAATLLQRDIYVLSPDHSGKNYRWLLFTPRFSYPEANTYDRCYITLCHTNGNHYDRIAS KTGSCNCGREAPVLSGIQTEVDLTEHIPEVV |
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