Gene
| Gene Model ID | pfu_aug2.0_845.1_17883 |
|---|---|
| Locus | scaffold845.1 : 151404 ... 165635 : - |
| To GenomeBrowser | scaffold845.1:151404..165635 |
| Genes list of scaffold | scaffold845.1 |
| Synonym | pfu_aug1.0_70.1_07357 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| elav-like protein 3 isoform x11 | GO:0000166 GO:0003723 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_845.1_17883.t2 | 3 | 1 | Nup35_RRM | 55 | 131 | 5.1e-07 | 29.3 | 6.2e-05 | 0.15 | 11.8 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 1 | RRM_1 | 62 | 132 | 0.0 | 220.2 | 3.1e-25 | 7.6e-22 | 76.7 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 1 | RRM_6 | 63 | 129 | 1.54143e-44 | 149.8 | 1.0e-16 | 2.5e-13 | 49.8 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 1 | RRM_5 | 76 | 136 | 1.7e-30 | 104.6 | 1.4e-14 | 3.4e-11 | 42.8 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 2 | RRM_6 | 148 | 210 | 1.54143e-44 | 149.8 | 5.3e-15 | 1.3e-11 | 44.2 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 2 | RRM_1 | 148 | 214 | 0.0 | 220.2 | 2.1e-22 | 5.3e-19 | 67.6 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 2 | Nup35_RRM | 149 | 214 | 5.1e-07 | 29.3 | 0.00043 | 1.1 | 9.0 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 2 | RRM_5 | 164 | 223 | 1.7e-30 | 104.6 | 2.1e-09 | 5.2e-06 | 26.2 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 3 | RRM_6 | 286 | 355 | 1.54143e-44 | 149.8 | 1.5e-17 | 3.8e-14 | 52.4 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 3 | RRM_1 | 286 | 355 | 0.0 | 220.2 | 6.5e-24 | 1.6e-20 | 72.4 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 3 | Nup35_RRM | 287 | 332 | 5.1e-07 | 29.3 | 0.01 | 25.0 | 4.6 |
| pfu_aug2.0_845.1_17883.t2 | 3 | 3 | RRM_5 | 300 | 359 | 1.7e-30 | 104.6 | 2.5e-11 | 6.1e-08 | 32.3 |
Transcript
| Transcript ID | pfu_aug2.0_845.1_17883.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_845.1_17883.t1 atgcagtacttgaaattagttcagattagtcaacaacctaacctagcagagctgcagatggaccatggaccacccactca cgcactgcaccaccaaaatgggggtaccacctccccctcctccacgggctcacagaccgatgacaacactagtaaaacca acctcatagtaaactatctaccacaaaccatgactcaggaggagatccgggctctcttctctagtatcggtgaagtagaa agctgcaagcttatccgtgataaacctactggacaaagtctaggatatggatttgtcaactacaaaaatccagcggacgc agagaaagccatcaacaccctaaatggtctacgactgcagaacaaacttattaaggtttcattagctcgcccaagctgcg agagtattaaaggagcaaacctatacattagcggactacccaagtccttgactcagttggacctagagaaattgttttca gattgtgggaacattatcacttccagaatactttatgaccaaaatacaggtctgtccaagggggtcggtttcatacgctt tgaccaacgagtagaggcagagagggccatccagaagctgaacggtacaattccagagggagcaactgaaccaattacag tcaagtttgcaaactcaccaagttccaacaagaacggagcagctcttacaccactgacattagcaccatatttaccacaa acacgcagatactctccattggatcccggctccatattgggaaccaccaacaccattatccccacggcaacggctgcagc tgcagggagcgcactaaacggggctggatggtgtatctttgtttacaacttagcgcctgaaacggaggacagtactttat ggcagttgtttggcccgttcggagctgtgcaaaatgtcaaggtcattcgagatttccaaactcagaagtgcaaaggattt ggctttgtaaccatgacaaactatgacgaagctttggttgccatacagagtttgaatggatttgctctgggaaaccgggt tcttcaagtctcattcaagacaaacaaatgcaagtcataa |
|
| Transcript ID | pfu_aug2.0_845.1_17883.t2 |
| Definition | - |
>pfu_aug2.0_845.1_17883.t2 atgatctccttcaccaacatgatgagtttaccacaacagaaactaattagtcaacaacctaacctagcagagctgcagat ggaccatggaccacccactcacgcactgcaccaccaaaatgggggtaccacctccccctcctccacgggctcacagaccg atgacaacactagtaaaaccaacctcatagtaaactatctaccacaaaccatgactcaggaggagatccgggctctcttc tctagtatcggtgaagtagaaagctgcaagcttatccgtgataaacctactggacaaagtctaggatatggatttgtcaa ctacaaaaatccagcggacgcagagaaagccatcaacaccctaaatggtctacgactgcagaacaaacttattaaggttt cattagctcgcccaagctgcgagagtattaaaggagcaaacctatacattagcggactacccaagtccttgactcagttg gacctagagaaattgttttcagattgtgggaacattatcacttccagaatactttatgaccaaaatacaggtctgtccaa gggggtcggtttcatacgctttgaccaacgagtagaggcagagagggccatccagaagctgaacggtacaattccagagg gagcaactgaaccaattacagtcaagtttgcaaactcaccaagttccaacaagaacggagcagctcttacaccactgaca ttagcaccatatttaccacaaacacgcagatactctccattggatcccggctccatattgggaaccaccaacaccattat ccccacggcaacggctgcagctgcagggagcgcactaaacggggctggatggtgtatctttgtttacaacttagcgcctg aaacggaggacagtactttatggcagttgtttggcccgttcggagctgtgcaaaatgtcaaggtcattcgagatttccaa actcagaagtgcaaaggatttggctttgtaaccatgacaaactatgacgaagctttggttgccatacagagtttgaatgg atttgctctgggaaaccgggttcttcaagtctcattcaagacaaacaaatgcaagtcataa |
|
Protein
| Protein ID | pfu_aug2.0_845.1_17883.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_845.1_17883.t1 MQYLKLVQISQQPNLAELQMDHGPPTHALHHQNGGTTSPSSTGSQTDDNTSKTNLIVNYLPQTMTQEEIRALFSSIGEVE SCKLIRDKPTGQSLGYGFVNYKNPADAEKAINTLNGLRLQNKLIKVSLARPSCESIKGANLYISGLPKSLTQLDLEKLFS DCGNIITSRILYDQNTGLSKGVGFIRFDQRVEAERAIQKLNGTIPEGATEPITVKFANSPSSNKNGAALTPLTLAPYLPQ TRRYSPLDPGSILGTTNTIIPTATAAAAGSALNGAGWCIFVYNLAPETEDSTLWQLFGPFGAVQNVKVIRDFQTQKCKGF GFVTMTNYDEALVAIQSLNGFALGNRVLQVSFKTNKCKS |
|
| Protein ID | pfu_aug2.0_845.1_17883.t2 |
| Definition | - |
>pfu_aug2.0_845.1_17883.t2 MISFTNMMSLPQQKLISQQPNLAELQMDHGPPTHALHHQNGGTTSPSSTGSQTDDNTSKTNLIVNYLPQTMTQEEIRALF SSIGEVESCKLIRDKPTGQSLGYGFVNYKNPADAEKAINTLNGLRLQNKLIKVSLARPSCESIKGANLYISGLPKSLTQL DLEKLFSDCGNIITSRILYDQNTGLSKGVGFIRFDQRVEAERAIQKLNGTIPEGATEPITVKFANSPSSNKNGAALTPLT LAPYLPQTRRYSPLDPGSILGTTNTIIPTATAAAAGSALNGAGWCIFVYNLAPETEDSTLWQLFGPFGAVQNVKVIRDFQ TQKCKGFGFVTMTNYDEALVAIQSLNGFALGNRVLQVSFKTNKCKS |
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