Gene
| Gene Model ID | pfu_aug2.0_845.1_17886 |
|---|---|
| Locus | scaffold845.1 : 186570 ... 198011 : + |
| To GenomeBrowser | scaffold845.1:186570..198011 |
| Genes list of scaffold | scaffold845.1 |
| Synonym | pfu_aug1.0_17138.1_11010 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tyrosine-protein kinase abl- partial | GO:0003924 GO:0004715 GO:0005524 GO:0005525 GO:0018108 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_845.1_17886.t1 | 1 | 1 | SH3_9 | 12 | 50 | 3.5e-06 | 26.5 | 4.4e-09 | 7.2e-06 | 25.4 |
| pfu_aug2.0_845.1_17886.t1 | 1 | 1 | SH2 | 60 | 135 | 1.3e-24 | 85.8 | 1.9e-27 | 3.2e-24 | 84.5 |
| pfu_aug2.0_845.1_17886.t1 | 1 | 1 | Pkinase_Tyr | 176 | 414 | 0.0 | 289.1 | 0.0 | 0.0 | 288.4 |
| pfu_aug2.0_845.1_17886.t1 | 1 | 1 | Pkinase | 178 | 391 | 3.78351e-44 | 150.7 | 0.0 | 6.5861e-44 | 150.0 |
| pfu_aug2.0_845.1_17886.t1 | 1 | 1 | F_actin_bind | 1131 | 1237 | 2.4e-19 | 69.1 | 2.8e-22 | 4.7e-19 | 68.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_845.1_17886.t1 | gi|241074630|ref|XP_002408731.1| | tyrosine kinase, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_845.1_17886.t1 | gi|751202884|ref|XP_011174103.1| | PREDICTED: tyrosine-protein kinase Abl-like, partial [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_845.1_17886.t1 | gi|641658517|ref|XP_008180747.1| | PREDICTED: tyrosine-protein kinase Abl isoform X2 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_845.1_17886.t1 | gi|193662043|ref|XP_001949462.1| | PREDICTED: tyrosine-protein kinase Abl isoform X1 [Acyrthosiphon pisum] | 0.0 |
| pfu_aug2.0_845.1_17886.t1 | gi|572269665|ref|XP_006612847.1| | PREDICTED: tyrosine-protein kinase Abl-like isoform X5 [Apis dorsata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_845.1_17886.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_845.1_17886.t1 atgcctcaaattctgctacatctttctatcaacttgcactttgttgaaggggaacaagtcaccatcttgggctataacaa aggaggggagtggtgtgaggtaaagaacaaggcaggagacataggatgggtcccctccaactacatagcacctgtcaaca gtctcgacaagttctcctggtaccacggacagatttcccggaacgcatcagaatatctcctcagcagtggtataaacgga agctttctggtgcgtgaaagtgaaagtagtccaggtcaaaggtcaatctcagtacggttcgaagggagagtgtatcatta caggataagtgaggattctgacggaaaggtgtatgtcacattggagcataggtttaacactcttgctgagcttgtccatc accattccatacactcggacggtttggtaacgacactcctgtaccccgcccctaaacgacagaaaccaacggtgtttggt ctgagtccggagcctgataggtgggaaatcgaacgaacagaaatagccatgaaacatagattgggtggaggtcaatatgg agatgtatacgaggcaatatggaaacgatacaacaagacagtagctgttaaaacactaaaggaagacactatggccttga aagatttcctagaagaagcttgtattatgaaggaaatgaaacatccaaatctggtacaactacttggtgtgtgtaccaga gagcctcctttctatatagtcacagaattcatggctcagggaaatttattagattttctccgagggacacccaaggagga gatgggaccgacagtgctaatgtacatggctacgcagatagcatcgggtatggcttacctggaggctaaaatgtttatac acagggatctagctgccaggaattgtttagtaggcccggaccatctagtcaaagttgctgattttggtctggcaaggctg atgaaggacgacacatacactgcacatgctggtgctaaattccccataaaatggacggcaccagagggactcgcttttaa tagattctctacaagatctgatgtttgggcatttggagttttattatgggagttagccacatatggtatgtccccctatc ctggagtggaactgaccgaggtgtaccatttattagagaggggttacaggatggaccgtccagctggctgtccagcaaat gtttacgaattaatgatgagataggtggagaaggaactagagaaaactgataagaagattccaattctgggaggatcgaa gaaaatacgagtccctcagcaaccagtaccaagcgtagagagccctgatcacattcctgatagcgggagaatgagtgcag gttccacacctatagctggtagaagagctttaccagggatggatgaccctgatgctacacttcggcaagtgtctaaagtg ctgtcaagcaaggccaaaaagaaaggtggaccagctcctgcacctccgagacgtacaacatcatgtaaagaccctaacga tggctccaaagacatggagaatgaactcaaagcaaaaatgaaactacaaaaagcaaaaattgaaagctcaactcttgtag aacattttggtgaagatgatgccgtagagagaaattctgtgaatagtgactttgctcctactttcactttacaacctgga aaacgtctggaattgggatctccgaaaaatttccaaaggaccgattctaaagatagcgcaacagagggtaaagtggagga tagtgggatttctcagagtagtacggacagtgtgaaacgtacaactatagataaatcaaaatacattattaataaagaca gcgctttaaaatcatcaagttccttcgatcgttcttcagaacatggaagtgctcgtaaatttggatctgcatatcatagg gaaactagattagcttctgaaatagaaaatactaaaaggtctgacaaggagactagtacaatggaggaaaatactgacac tgtaggtattaaagggaagcattatcccaagaaagctttacctcttccccagcatgccattcaacgaagaaaatactctg aaaattcacaacactttgcggcaggcagaagtaattccttaacttcccagagtttagacgcagatagcagttccgtaacg ataggcagattggatgtaaataacgtaacaaaggccattagtaggtatggaaccattcctaagggtagaagaatcgaggc gtatttagcatctatggaaagtgggattgagccacaagtacaggatatgccacctcccatagaggaccatgattctggca cagacacggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctagcgtggcatc atgtcctgtcttattgccggaagaacagcccgatagaggtgacgtaaaactcactcagtcccaacagtcgaaaacgaaca ctagtgatccaggtattaaacccgaacctaatgtgaaaccttcagcatttgttaaatctcaatcacagcatatgattgtc gaaaatcaaaactcgaattttaatccgttattgcaaagacataagtccgatcttacttctggtgcctcaaacattgacac gcctactagtactaagcattttagtgatcctccgaaacccaaacctagtcctagaatatcacgtatgtttattgatcatg atcaacatgactccagtcacgattcaccgagatctgagattccgtctatgtccccagcaatgtttaagtccgtacagggt catatagacttcagtttaggtagtaatgacaatactggggttggaaatgaagatggctttacggattatagaaataaatc tgattacaaagctcccgctagacctcctttcacacataaaataagatctgcatcaacaggtgattttcctggaagggatg aagggcctcaagatggaatgttctcttctccacaggataataacaaacagagtgcctcagtgctttcaaaagtggccatg ttccaatctgctggaccagaatttgggtctttcaaaccgtttgtgcgcggtgaaaatgagcgtagctctttgcgagacga tcgcagcacaggatatgacgttgtacgaggcgcaactcgagaggaagttatttataaacctgttttaccaaaagcatcag caagtgccagtatgtcaagtgtgatgcagtcatctttaatgtcaaaatctatgatggattctttagaaccagtccctgaa acgtattgtcacggtcagaattccgattccgacacgccgcaagttacgcgtgaaactatttttagcacgtctgctgacct gctgtcttgtattgaatcattaacaacagcaggaaacaaaactagtacaaattttatggtgttgtctgataatattttgc attttcatgagctgtgctcaaattttattgacactttgccccctcatgcaaaattccaggctaaagagttgttatccagg ttacaaactcacagtgaaagtgtaaagactttctgtagcacaaatcctgccagtggagcgaaaattattaacgatgtgaa agccactgttcaagaagtcattgatctgattaagagtgattag |
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Protein
| Protein ID | pfu_aug2.0_845.1_17886.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_845.1_17886.t1 MPQILLHLSINLHFVEGEQVTILGYNKGGEWCEVKNKAGDIGWVPSNYIAPVNSLDKFSWYHGQISRNASEYLLSSGING SFLVRESESSPGQRSISVRFEGRVYHYRISEDSDGKVYVTLEHRFNTLAELVHHHSIHSDGLVTTLLYPAPKRQKPTVFG LSPEPDRWEIERTEIAMKHRLGGGQYGDVYEAIWKRYNKTVAVKTLKEDTMALKDFLEEACIMKEMKHPNLVQLLGVCTR EPPFYIVTEFMAQGNLLDFLRGTPKEEMGPTVLMYMATQIASGMAYLEAKMFIHRDLAARNCLVGPDHLVKVADFGLARL MKDDTYTAHAGAKFPIKWTAPEGLAFNRFSTRSDVWAFGVLLWELATYGMSPYPGVELTEVYHLLERGYRMDRPAGCPAN VYELMMRXVEKELEKTDKKIPILGGSKKIRVPQQPVPSVESPDHIPDSGRMSAGSTPIAGRRALPGMDDPDATLRQVSKV LSSKAKKKGGPAPAPPRRTTSCKDPNDGSKDMENELKAKMKLQKAKIESSTLVEHFGEDDAVERNSVNSDFAPTFTLQPG KRLELGSPKNFQRTDSKDSATEGKVEDSGISQSSTDSVKRTTIDKSKYIINKDSALKSSSSFDRSSEHGSARKFGSAYHR ETRLASEIENTKRSDKETSTMEENTDTVGIKGKHYPKKALPLPQHAIQRRKYSENSQHFAAGRSNSLTSQSLDADSSSVT IGRLDVNNVTKAISRYGTIPKGRRIEAYLASMESGIEPQVQDMPPPIEDHDSGTDTXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXSVASCPVLLPEEQPDRGDVKLTQSQQSKTNTSDPGIKPEPNVKPSAFVKSQSQHMIV ENQNSNFNPLLQRHKSDLTSGASNIDTPTSTKHFSDPPKPKPSPRISRMFIDHDQHDSSHDSPRSEIPSMSPAMFKSVQG HIDFSLGSNDNTGVGNEDGFTDYRNKSDYKAPARPPFTHKIRSASTGDFPGRDEGPQDGMFSSPQDNNKQSASVLSKVAM FQSAGPEFGSFKPFVRGENERSSLRDDRSTGYDVVRGATREEVIYKPVLPKASASASMSSVMQSSLMSKSMMDSLEPVPE TYCHGQNSDSDTPQVTRETIFSTSADLLSCIESLTTAGNKTSTNFMVLSDNILHFHELCSNFIDTLPPHAKFQAKELLSR LQTHSESVKTFCSTNPASGAKIINDVKATVQEVIDLIKSD |
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