Gene
| Gene Model ID | pfu_aug2.0_845.1_17887 |
|---|---|
| Locus | scaffold845.1 : 200714 ... 212889 : - |
| To GenomeBrowser | scaffold845.1:200714..212889 |
| Genes list of scaffold | scaffold845.1 |
| Synonym | pfu_aug1.0_16858.1_54349 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_845.1_17887.t1 | 1 | 1 | Ependymin | 88 | 205 | 7.7e-09 | 35.3 | 6.7e-13 | 9.9e-09 | 35.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_845.1_17887.t1 | gi|676490416|ref|XP_009065263.1| | hypothetical protein LOTGIDRAFT_155462 [Lottia gigantea] | 1.0e-09 |
| pfu_aug2.0_845.1_17887.t1 | gi|676490419|ref|XP_009065264.1| | hypothetical protein LOTGIDRAFT_229628 [Lottia gigantea] | 4.0e-08 |
| pfu_aug2.0_845.1_17887.t1 | gi|676490502|ref|XP_009065291.1| | hypothetical protein LOTGIDRAFT_229639 [Lottia gigantea] | 7.0e-08 |
| pfu_aug2.0_845.1_17887.t1 | gi|676490422|ref|XP_009065265.1| | hypothetical protein LOTGIDRAFT_155464 [Lottia gigantea] | 7.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_845.1_17887.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_845.1_17887.t1 atgaaactgattctatcgcttcttttacttctgcctgttgtattttgtgcgacacaaggcggtgatgaccaccctccatg ctgctggaaaagatcgggaaaacataatttccggatgatcggcggaaaagttgatccggccacgggtgaaccagtttctg ttgaatcacgtggatatggattttcaacggaaagtggcaggaagaggataatctacagacatgtttcgtattctggagca tcggagattcaggagacggaaattgtcaactacgatacgatgaaatggtacgtgatatctaatggcacttgtaagacgta tgacatcctcttccctatgccgaggtcatgtgttccagccaatgccacttacaccggagaatctgttatcggatccaccc ctggacatcaagtgagaatccgccattataacctggactggatggaccaccggggatataatattcggcttggggtcgag gccgagacgtgtgatgttgtcatagagacagactatggcactgtagatagagcgaaggcgatctacacgtacttcatgag tgatagaggaccgtatcacccagatgactcattgtttgttccaccaccacactgtcccccacacgaggccaccactacgg ccgctccacatacttga |
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Protein
| Protein ID | pfu_aug2.0_845.1_17887.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_845.1_17887.t1 MKLILSLLLLLPVVFCATQGGDDHPPCCWKRSGKHNFRMIGGKVDPATGEPVSVESRGYGFSTESGRKRIIYRHVSYSGA SEIQETEIVNYDTMKWYVISNGTCKTYDILFPMPRSCVPANATYTGESVIGSTPGHQVRIRHYNLDWMDHRGYNIRLGVE AETCDVVIETDYGTVDRAKAIYTYFMSDRGPYHPDDSLFVPPPHCPPHEATTTAAPHT |
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