Gene
| Gene Model ID | pfu_aug2.0_846.1_21204 |
|---|---|
| Locus | scaffold846.1 : 60576 ... 66150 : + |
| To GenomeBrowser | scaffold846.1:60576..66150 |
| Genes list of scaffold | scaffold846.1 |
| Synonym | pfu_aug1.0_16385.1_10915 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_846.1_21204.t1 | 1 | 1 | RhoGAP | 2 | 102 | 4.9e-26 | 91.1 | 2.1e-29 | 1.0e-25 | 90.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_846.1_21204.t1 | gi|676489087|ref|XP_009064823.1| | hypothetical protein LOTGIDRAFT_236248 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_846.1_21204.t1 | gi|524877479|ref|XP_005095441.1| | PREDICTED: dentin sialophosphoprotein-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_846.1_21204.t1 | gi|291241883|ref|XP_002740839.1| | PREDICTED: uncharacterized protein LOC100370086 [Saccoglossus kowalevskii] | 3.0e-36 |
| pfu_aug2.0_846.1_21204.t1 | gi|156387614|ref|XP_001634298.1| | predicted protein [Nematostella vectensis] | 4.0e-35 |
| pfu_aug2.0_846.1_21204.t1 | gi|583981562|ref|XP_006786083.1| | PREDICTED: rho GTPase-activating protein 11A-like isoform X2 [Neolamprologus brichardi] | 2.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_846.1_21204.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_846.1_21204.t1 atgaaagatgccaatgtgtttgatgtgaccagccttgtcaagcagttctttcgcaagttaccagagccattgatcaccag tatgtaccatgatgccttcatcaggtgtaaccagttaggtgatactgaccaatcaacacaagccacacttctgttatgtt tgctgctgcccagtgagcaccttagtactctacgttacttccttctattgttgtctcagataacaatccatgcagaccaa aacaagatggatgcaggaaacctagctgtggtattggctccaaacctgatgcacgtaaataataagagcgagaaaatgaa ttcctctgaaaagaagctattgcaggttcagacttcagtcgtagaacttctgatctgtaatgcagcctctgtaggtatgg tatcaaaggagctttgtgagaaagccaacctgatgacagacgtatggggcaccgaggatgagctagatgctagtggagat gccctggaggactcgcacaatgtcaaggacaagaggaagtggaggaagaggtcagggtcatttcaaggcattctgagtac aatcgccagcagcatgtctaaatggcgccgtagcactgatggtaaatctggtaacctgagtcaggccagcaatatgagca ccatgagccagtatagcaacatgagtcagatgagcaacaaacatgaccagagttctatggtacagaataccacacagcaa tctgtagatctaccggcatctatggccacaccagtcgttattaggaagaggaaagcttctggggacggccatcctttctc agcatcaaagaagaaagccatacttaaaggtctaccaaaccaagcagccctggctaacaccccatacactccagcttctg ctatgaagaaattagacattactgtgttcagtcgagatttttga |
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Protein
| Protein ID | pfu_aug2.0_846.1_21204.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_846.1_21204.t1 MKDANVFDVTSLVKQFFRKLPEPLITSMYHDAFIRCNQLGDTDQSTQATLLLCLLLPSEHLSTLRYFLLLLSQITIHADQ NKMDAGNLAVVLAPNLMHVNNKSEKMNSSEKKLLQVQTSVVELLICNAASVGMVSKELCEKANLMTDVWGTEDELDASGD ALEDSHNVKDKRKWRKRSGSFQGILSTIASSMSKWRRSTDGKSGNLSQASNMSTMSQYSNMSQMSNKHDQSSMVQNTTQQ SVDLPASMATPVVIRKRKASGDGHPFSASKKKAILKGLPNQAALANTPYTPASAMKKLDITVFSRDF |
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