Gene
| Gene Model ID | pfu_aug2.0_85.1_16874 |
|---|---|
| Locus | scaffold85.1 : 125497 ... 158280 : + |
| To GenomeBrowser | scaffold85.1:125497..158280 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_5744.1_16749 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial intermediate peptidase | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16874.t1 | 2 | 1 | Peptidase_M3 | 604 | 766 | 0.0 | 241.9 | 8.9e-35 | 1.3e-30 | 106.8 |
| pfu_aug2.0_85.1_16874.t1 | 2 | 2 | Peptidase_M3 | 767 | 894 | 0.0 | 241.9 | 5.99756e-43 | 8.8e-39 | 133.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_85.1_16874.t1 | gi|632965343|ref|XP_007898842.1| | PREDICTED: mitochondrial intermediate peptidase isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_85.1_16874.t1 | gi|675402765|ref|XP_008919584.1| | PREDICTED: mitochondrial intermediate peptidase [Manacus vitellinus] | 0.0 |
| pfu_aug2.0_85.1_16874.t1 | gi|524902650|ref|XP_005107554.1| | PREDICTED: mitochondrial intermediate peptidase-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_85.1_16874.t1 | gi|674100296|ref|XP_008823222.1| | PREDICTED: mitochondrial intermediate peptidase isoform X3 [Nannospalax galili] | 0.0 |
| pfu_aug2.0_85.1_16874.t1 | gi|632965341|ref|XP_007898841.1| | PREDICTED: mitochondrial intermediate peptidase isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16874.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16874.t1 atgcctttctctttgttgccaaacaagaggcccaggggccacaacgctcacctgagaacacttagcatgttaagacaaga caatgtttatttaaaattggcatatatgaaaacagaccctggtgatgtgtgtatataccatggtgatatgtgtatagacc ctagtgatgtgtgtatataccatggtgatatgtgtatagatcctggtgaggtgtgtatagaccctggtgatgtgtgtata taccctggtgatatttgtatagacaattgtgatgtgtgcatagaccatagtggtgtgtgtatagaccgtggtgatgagtg tatagactctggtgatacgtgtatagaccatggtgatgtgtataaagactctggtgatatcctggtgtgtatagaccctg gtgatatgtgtatataccctggtgatatttgtaaagaccattgtgatgtgtgtatagaccatagtggtatgtgtatagac cgtggtgatgagtgtatagaccatggtgatgagtgtatagaccgtggtgatgagtgtatagaccatggtgatgtgtatat agactgtggtaatgtgtgtatagaccctggtgatatgtgtatagactatgataatgtgtgtatagacaatggtgatgagt gtatagaccgtggtgatgagtgtataggccattgtgatgagtgtacagaccgtgatgatgcgtgtatagaccatggtgat gtgtatatagactgtggtaatgtgtgtatagactctggtgatatgtgtatagactatgatgatgtgtgtatagacaatgg tgatgagtgtatagacactgttgatgtgtgtatagaccctggtgatgagcgtatagaccctgagtatgtgtatatatacc gtggtgatgagtgtatagaccctggtggcgtgtctatagaccatggtgatatgtgtatagaccttgatgatatgtgtaaa gaccgtggtgacgtgtgtatagcccatggtggtatgtgtacagaccatggtgatgtgtgtatagaccgtggtgatgtgtg tatagaccatggtgatgagtgtaaagaccctggtggtgtgtgtatagaccatggtgatgtgtgtatagaccatggtgata tatgtatagtccatgtcaatgtgtgtatagaccgtagagatgtatgtaaacaccaagttgatatgtgtatggaccgtggt tatgtgtgtatagaccctggtgatgaatgtatagaccgtggtgatgcgtgtatagaccatgttgatgtgtatatagactc tggtgatgtgtgtatagaccctgctgatatgtgtatagaccatgatgatgtgtgtatagacaatggtgatgagtgtatag accctgttgatttgtaccatgttgatgtgtgtatagaccgtggagatgtatgtaaaggccatggtgatatgtgtctagac cgtggttacgtgtgtatagaccatgttgatgagtgtatagaccgtggtgatggccttctgctaattcctgaacttcagtc aagtgccggctttaaagatttagaacgaaatgttattactgaagtcaagtcccttgttaatgaagcaacagatcccaaca gaaagcgtaaagttgttcagatatttgatgacctttcagacacgttatgtaaggttgctgatatggcagatatggtacga gtgttacatcctgaccctaaatataacgcagcagctgaggaggttgtcatcaaactgtcaggaatagtagaacatttcaa cattgatggtgacaatgtgttagtgacaggattatttcaagatcactggaatgactatgtgagagaagcagcgtatcgta tatacctacatcctataccccagcagacagagttactggaggggttactcctcagtagacatcaactcgctgatcttaca ggatttccgtcatttgcccatcgggctctccgcggcactcttgctgaaacagttgagaatgtggaggagtttttagacgc tctctcaggaaaactacattccagggttaagaaggacttaactgtgatttctaatgcaaagaagtattatggaaataaag gatcaaaggtagtgatgccttgggacacatcattttattcagctttagctagacagaaaaagtacaaagtagatacccag gatttcttgccatacttttcactaggatgttgcatggagggtctcaatacagttttccgtagtatatttgatgtgacatt acagccagtagatctagaatcaggggaaacatgggcacatgatgtctacaagctggattgtcatttcctgatacaaggtg gtagggagttaggggatggtagttaccagttacctgtagtagtactgaagctgacgttaccccgcccccaggcctacatg ccggcattactcacacccgacatgatggagaatctattccatgagtttggtcacgccatgcactccatgttaggcaggac taaatatcaacacgtcacaggtactaggtgttccactgactttgctgagattccatctatacttatggagtactttgcct ctgatccaagggttatcagcagttttgccagacattataagacaggagaacctctcccggcatcgtctatagaagctctc tgtaattcaaagaaaatgtttatggcactggatcagtgccaacatagtaacaggatcagtgccaacattaatgataacat cagtaacaatataagtgacaacatcagtaacagtataagtaacaacatcaaagataccataattgacaaatcaaagataa cttcaaagacggcactagggacatcaatgataacattcacaacagtatccgtgacaattttgctggcattggtaacagta ccagtaacaatgtcaatgacaacatcagtagctacaactgaaaacctcagtaacaatatatgtgataacagctttaatgg cattagtgacacagtaccagtgacaatgtctatgacaacactagtgacaacataa |
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Protein
| Protein ID | pfu_aug2.0_85.1_16874.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16874.t1 MPFSLLPNKRPRGHNAHLRTLSMLRQDNVYLKLAYMKTDPGDVCIYHGDMCIDPSDVCIYHGDMCIDPGEVCIDPGDVCI YPGDICIDNCDVCIDHSGVCIDRGDECIDSGDTCIDHGDVYKDSGDILVCIDPGDMCIYPGDICKDHCDVCIDHSGMCID RGDECIDHGDECIDRGDECIDHGDVYIDCGNVCIDPGDMCIDYDNVCIDNGDECIDRGDECIGHCDECTDRDDACIDHGD VYIDCGNVCIDSGDMCIDYDDVCIDNGDECIDTVDVCIDPGDERIDPEYVYIYRGDECIDPGGVSIDHGDMCIDLDDMCK DRGDVCIAHGGMCTDHGDVCIDRGDVCIDHGDECKDPGGVCIDHGDVCIDHGDICIVHVNVCIDRRDVCKHQVDMCMDRG YVCIDPGDECIDRGDACIDHVDVYIDSGDVCIDPADMCIDHDDVCIDNGDECIDPVDLYHVDVCIDRGDVCKGHGDMCLD RGYVCIDHVDECIDRGDGLLLIPELQSSAGFKDLERNVITEVKSLVNEATDPNRKRKVVQIFDDLSDTLCKVADMADMVR VLHPDPKYNAAAEEVVIKLSGIVEHFNIDGDNVLVTGLFQDHWNDYVREAAYRIYLHPIPQQTELLEGLLLSRHQLADLT GFPSFAHRALRGTLAETVENVEEFLDALSGKLHSRVKKDLTVISNAKKYYGNKGSKVVMPWDTSFYSALARQKKYKVDTQ DFLPYFSLGCCMEGLNTVFRSIFDVTLQPVDLESGETWAHDVYKLDCHFLIQGGRELGDGSYQLPVVVLKLTLPRPQAYM PALLTPDMMENLFHEFGHAMHSMLGRTKYQHVTGTRCSTDFAEIPSILMEYFASDPRVISSFARHYKTGEPLPASSIEAL CNSKKMFMALDQCQHSNRISANINDNISNNISDNISNSISNNIKDTIIDKSKITSKTALGTSMITFTTVSVTILLALVTV PVTMSMTTSVATTENLSNNICDNSFNGISDTVPVTMSMTTLVTT |
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