Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_85.1_16875
Locus scaffold85.1 : 158327 ... 201761 : +
To GenomeBrowser scaffold85.1:158327..201761
Genes list of scaffold scaffold85.1
Synonym pfu_aug1.0_5744.1_16749

Manual annotation
Transcript
Transcript IDpfu_aug2.0_85.1_16875.t1
Definition-
>pfu_aug2.0_85.1_16875.t1
atggattctgaagaaggatttgcagatgaaggtcaaggaaaaacagatgacctatcgacctttgactttgacctgttgac
aggaagtggagatggaaacacttggtgtggtcaatgtaaaatttaccaacaggaaaaggagagtcttgagaaggaatatg
tacagaaattcaacacactaaaaaagaaaataatatcaacagagcctctgtttccaataaagaagtcaaggacatctcaa
ctgaggacaacagttacacgtccgattctgatggcagtcttgtcccagttcctgacaatcgtaaatttgtaccccaaaaa
ttatgatgtcctgtcaaaagaagtcactgactctaacaacaaaaaggagcagtacaggagggagagtgaggtacttaaaa
cccagctgacttcagctctgacccagctagaaccaaccaagaggagcaatgtaaacttagagacagagttgaagatgaag
cataaagagatacaggatctgaaggataagctgtcagctcaggaggtgatacaaaggcagtataaccagttgaacacatc
aacatcagattataaacaaaggatagaaacaatgcaaaaagaacattctaaaactgtcaaagatttagaattgaggtacg
cgtcttttgtagaggaggtcaaatccaccaaaacagaattggcgtcaacgaggaaagctcagatcaaagacgccagcaac
cttaagaagtccgtaagcagactggaaacatacttctcgatcctgaaggataatggtttgctaccaaaaggacataagcg
tctgagagttgagacgtacttcacaggaacagaatctatggaggaagatgttatgtcaacaccctggacattcagtcctc
tagtcagtatcctgtcacctctaccaccaactccaaaaccacataaggatgactctgaggaggatgacactgtgtctggg
agtggtaacagtatagacgatatggccgatcagctggaaaatgaactcctcaacctcccaacctcacgggaaatctctga
caatacctcacaggaagtctccgaccaaacctcacagcaaatctcagaccacacctctgatcatacctcacggcgtgaga
ggtacctctcatcaccactgtcacctatagcactgtgtggacaatcaacaggaaaacctacaagatcccctcttcctccg
tcattaagggagaaggtcttgctcaagtcaaaccgaaagcatatggcaattatagagaaacaaaatatcagtgcttccga
aactttgacttccctttcaaaagtttctaaggaaaatatagcaatgtctgtgttaggtatatcggaaaacttgtccgact
cagatgaagaaaacaaaatatcacatagcaacattatcaagtgtgacaaacttgttaagcatgaaaattctgcatttatc
aaatttatcaaagctgaaagtaagcctgttgagaaccatgtgacagacattgttaggactgtttgcgaagataatgtatc
tgtggataaacgaacaaaaagtaatgatatttcttttgagaagagaggacttcttcgctctgatactgggagttttgatt
tgagtgaattatcagagaaatgttcagaaaataaggaatcaattgctgccaaacctagtaagggaacaactggtatgaca
gaaaaaacggatatttcagacagtaaaaccagggtttctacagttgtaaaagagaaacccgaaacatcatgcgtaaagaa
tggtgctttgacattgtctcccaataggccggtcacacggaccctgacccggtcactaagtctctcctcagactctctta
ttgacaaggagcaggaagaattatcccccggtaaatgtaagactcgagctaaaactaacaacaataatctcagtgatagt
gcttatattcctgtatgttctaatttagtgccaaggttaaataatataaacaacgatactgtgcaacaaaattctgccgt
cacttttgatgttcaaactgctgaccagactgctgatatatgtgaaactgtcggtgaagtaagcaaaccaaatgtgtgca
gtaatacaataagtgagatatcagagaagaaggaggtaacaaacagcacaggagccactactgttagtagtacagggtct
gtagaaaaagatacatgtgaactgaacaaagaagtatcgtttatgagatgtaagggaagaagtaaaataccaaccggtaa
aagtctgaaggaatcgtttataagtgcaaaagaaccaaatatacaggtaaacaatgaaaaatctgatagattatcgccta
cgcaatcaatcaacactccagaacgttgtgttccatctattggaagaaaaagaattgctcataaagtgaaacattctgaa
agtcaacaaggcagcaaatcaaagttttcattattggcatctaaggaggaagaatgccatttgaaggaggaatcttcctt
acatgttgattctatgaagagcgagaatgataccaatgataaaacttgtgtaaatagtgaagatgataaaagtgaacatc
atattgatggttcaggagataagagactgacacgctctatgtcaagacaatgtagtacagggtttgtcgtcaaattgtct
ccatcattcagtggggaaaaatccaatatggggaatttattagacagcattttagaagatgaaatgaaagaagatcaaat
tgatggtgatgtagaggaaaaagatgtgaagaaatctttggaaagtaaagaattacagaattctttaccagacaaaaagg
agacatctgaggatggaagtggttttgtgaaagagcaggaaaatgccaaaataaaggaagattttgaacaacgaaatcct
aacacaatagagaaagaaaaggtcattagtgaagaaaataatcggagatgctcaatagacaaaaatgtaacacacatagg
tgtaactcctcttagagaaaatgatgttgccctatcaagtaatactcaacccagctcttcaggtcttgtatcaacaatac
agagccatatagatccactagtgaagtcaaccacaaatactgtttcagtatcaaacagttcaataactatccaagaagaa
acagagaagaaagacaatatgaagtgtgacaggtcaagaacagaaaatcatgatgttagaaaatctagtcctgttccatc
aactcctccagatgccatcacagtgagacctcatcatggatgtgccacaacaagctgtaagagagcaaagtcaccgtctg
tcacagcaggctgtaaaaaatctctgtcgccatgtccttttgcaagcggtaaaaaaggcaagtctgcaagtaccgtagta
agctgtaaaaaatctaagtcaccatctactttggcaagctgtaagagatccctttctccatcgtttgatgattccagcag
catacctgataaatcattgaaaggggaaaaactgaataaaaccaacattaagaggaaaagtgttgattccagagatgtac
caaatctggatgtttcaaaggagaagaaaccttgtttaccaagtgacaaacagaaacaggcaaatgccaaaggcagtaag
gctgttaaacctgggaaagatggcatcataaaggaaccttctacaaaccaacaaaaacattccatagaaaaagctttctg
ttcttctatgctaatacataagcttaggtgtagtgagatagaactcctcagtattataataagtcactgtgaagagaatg
gaccagcccaacctaggactcaaccattcttggcagtaggggagatgaggctactgcaactcttaaatcacttatttcag
aaaacagactggaaatcatcaaaggagaagttattgagatctctgtggaacgctatatttcttagagacgtagtaactca
ggctgccagatctgctctatgccggatttttactggtgtttcaaaatttgaaggtgatattgagcaggtcagagtgttgt
tcttccacatactacattgtgggtacctgaatggaccactactggctgttactatagctggcgtgtggcccagggctctc
tacagggacaactcgggagcaagtccaattctggtggtaatggaacattgcttgatgcagacgatggcagagaacagaca
aaaatatgagaagaaaccgtcattcttcaaagttcacttcacacaggccgctctcaaagacttaaacggcaaaataacta
gagggaagaagtgtaaccaagcctatatttgtgtcatacttcaaattgctgctggcttcatttcatccagagttaaggaa
cttggtcaaggattttcacagcaatctatacgaaaatacttcatccagatactgaacaacaaatcagcttcccaggagac
aaaggattgtgtattgactgcgttattagagatttcctacatagctcccatgtgtataatgacgtacggactacacatat
ggtatagtcataacaaagactccattcctcacagctggggaggtggtccaaatcagtatcaatggcccaaagcagggaaa
tggtccaaaccaggaaagtggtccaaatcagtatcaatggtccaaaccagggaaattgtccaaatcaggatcaatggtcc
aaaccagagaaatgctccaaaccagggaaatggtccaaatcagtatcaatggtccaaaccagggaaatggtctaaatcag
gatcagtggtccaaaccagagaaatagtccaaaccagggaaattgtccaaatcaggatcaatggtccaaaccagggaaat
gcaaaactaaacaaccaagagagtctgcaaaggagcaaaagtaaattagtaaatttacaatggagattagatcaggtgcc
tggagagggcaattatttcctgcttgctggcaacacctgttactttagcttgaataatcaaaattcaatgttttctttca
accttatagaccaggaaatgttacgatggtttgtgttttattgtatcgggctaaaattctgcagtgataaagaaataacc
gttatagacttgaacatgatggacgaggtacctagtaatggattgttggtcagtattttgtatgagagggacgtacgaaa
tgtgatgtccagtcaccctggtcaacttctgatgtccgagccgtgtacggaaccggatggtcctgctagctcgtcccgta
ggtcatcaaaaatgtcgatatcatcgtcatcctcctcgtcgtcgtcatcatcgtcggaaagctcagagccagagtcacag
gaagtaaactctttgagctataggatctgtagaggaagtggacggtcagtgtatgttgttacgcgggttcctaaacaact
gtcacgtcttatatgtgtacagtacctcacactcaaagtacgtatcgaaacatcgtatccagtgtacagtacctcacact
caaagtacgtatctaaacatcgtatacagtgtacagtacctcacagtcaaagtacgtatctaaacatcgtatccagtgta
cagcaccttacactcaaagtacgtatcgaaacatcgtatccagtgtacagtacctcacactcaaagtacgtactatctag
acatcgtatacagtgtacagtacctcacactcaaagtacgtactatctagacatcgtatacagtgtacagtacctcacac
tcaaacctcactcagatgtcaacctagagagtgttgatgaaagattcttcctgataaaggagttaacttccaaagagtca
gttgtagaatctctaccatacatagatatttgtgtagagtacagtcagcattacggttgtctgacgatgcacaccgagag
gaaacctacagaggcagaccagccttccttgcttactatgtacacacaaaatacagaggaactcagatcgtgtgatgtag
aatccgggaacaatccttatgtcgctgtgttacagagagaaccagccaaccaaaatgaacaaatttcaatatcaaccaat
cagaatagacaaatgacaaacattttaagttaccggagatggctttgctgctttgtaggacaagaaaataattatggatt
agagacagagttcagaaatatcagctcacatgaatcttcgtcagggaacgagaatgatagaacgagtaatgaacagattc
aatgttccgaaattctcagcttcgtagaccccggccaagttaataaatatgcgtgtaggtccagatctcataggaccatg
gattaa

Protein
Protein IDpfu_aug2.0_85.1_16875.t1
Definition-
>pfu_aug2.0_85.1_16875.t1
MDSEEGFADEGQGKTDDLSTFDFDLLTGSGDGNTWCGQCKIYQQEKESLEKEYVQKFNTLKKKIISTEPLFPIKKSRTSQ
LRTTVTRPILMAVLSQFLTIVNLYPKNYDVLSKEVTDSNNKKEQYRRESEVLKTQLTSALTQLEPTKRSNVNLETELKMK
HKEIQDLKDKLSAQEVIQRQYNQLNTSTSDYKQRIETMQKEHSKTVKDLELRYASFVEEVKSTKTELASTRKAQIKDASN
LKKSVSRLETYFSILKDNGLLPKGHKRLRVETYFTGTESMEEDVMSTPWTFSPLVSILSPLPPTPKPHKDDSEEDDTVSG
SGNSIDDMADQLENELLNLPTSREISDNTSQEVSDQTSQQISDHTSDHTSRRERYLSSPLSPIALCGQSTGKPTRSPLPP
SLREKVLLKSNRKHMAIIEKQNISASETLTSLSKVSKENIAMSVLGISENLSDSDEENKISHSNIIKCDKLVKHENSAFI
KFIKAESKPVENHVTDIVRTVCEDNVSVDKRTKSNDISFEKRGLLRSDTGSFDLSELSEKCSENKESIAAKPSKGTTGMT
EKTDISDSKTRVSTVVKEKPETSCVKNGALTLSPNRPVTRTLTRSLSLSSDSLIDKEQEELSPGKCKTRAKTNNNNLSDS
AYIPVCSNLVPRLNNINNDTVQQNSAVTFDVQTADQTADICETVGEVSKPNVCSNTISEISEKKEVTNSTGATTVSSTGS
VEKDTCELNKEVSFMRCKGRSKIPTGKSLKESFISAKEPNIQVNNEKSDRLSPTQSINTPERCVPSIGRKRIAHKVKHSE
SQQGSKSKFSLLASKEEECHLKEESSLHVDSMKSENDTNDKTCVNSEDDKSEHHIDGSGDKRLTRSMSRQCSTGFVVKLS
PSFSGEKSNMGNLLDSILEDEMKEDQIDGDVEEKDVKKSLESKELQNSLPDKKETSEDGSGFVKEQENAKIKEDFEQRNP
NTIEKEKVISEENNRRCSIDKNVTHIGVTPLRENDVALSSNTQPSSSGLVSTIQSHIDPLVKSTTNTVSVSNSSITIQEE
TEKKDNMKCDRSRTENHDVRKSSPVPSTPPDAITVRPHHGCATTSCKRAKSPSVTAGCKKSLSPCPFASGKKGKSASTVV
SCKKSKSPSTLASCKRSLSPSFDDSSSIPDKSLKGEKLNKTNIKRKSVDSRDVPNLDVSKEKKPCLPSDKQKQANAKGSK
AVKPGKDGIIKEPSTNQQKHSIEKAFCSSMLIHKLRCSEIELLSIIISHCEENGPAQPRTQPFLAVGEMRLLQLLNHLFQ
KTDWKSSKEKLLRSLWNAIFLRDVVTQAARSALCRIFTGVSKFEGDIEQVRVLFFHILHCGYLNGPLLAVTIAGVWPRAL
YRDNSGASPILVVMEHCLMQTMAENRQKYEKKPSFFKVHFTQAALKDLNGKITRGKKCNQAYICVILQIAAGFISSRVKE
LGQGFSQQSIRKYFIQILNNKSASQETKDCVLTALLEISYIAPMCIMTYGLHIWYSHNKDSIPHSWGGGPNQYQWPKAGK
WSKPGKWSKSVSMVQTREIVQIRINGPNQRNAPNQGNGPNQYQWSKPGKWSKSGSVVQTREIVQTREIVQIRINGPNQGN
AKLNNQESLQRSKSKLVNLQWRLDQVPGEGNYFLLAGNTCYFSLNNQNSMFSFNLIDQEMLRWFVFYCIGLKFCSDKEIT
VIDLNMMDEVPSNGLLVSILYERDVRNVMSSHPGQLLMSEPCTEPDGPASSSRRSSKMSISSSSSSSSSSSSESSEPESQ
EVNSLSYRICRGSGRSVYVVTRVPKQLSRLICVQYLTLKVRIETSYPVYSTSHSKYVSKHRIQCTVPHSQSTYLNIVSSV
QHLTLKVRIETSYPVYSTSHSKYVLSRHRIQCTVPHTQSTYYLDIVYSVQYLTLKPHSDVNLESVDERFFLIKELTSKES
VVESLPYIDICVEYSQHYGCLTMHTERKPTEADQPSLLTMYTQNTEELRSCDVESGNNPYVAVLQREPANQNEQISISTN
QNRQMTNILSYRRWLCCFVGQENNYGLETEFRNISSHESSSGNENDRTSNEQIQCSEILSFVDPGQVNKYACRSRSHRTM
D

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495