Gene
| Gene Model ID | pfu_aug2.0_85.1_16877 |
|---|---|
| Locus | scaffold85.1 : 219207 ... 225684 : + |
| To GenomeBrowser | scaffold85.1:219207..225684 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_9340.1_02747 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16877.t1 | 5 | 1 | Cadherin_2 | 32 | 115 | 2.3e-16 | 59.1 | 1.1e-14 | 8.1e-11 | 41.3 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 1 | Cadherin | 65 | 106 | 0.0 | 302.8 | 7.7e-06 | 0.057 | 13.6 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 2 | Cadherin | 151 | 245 | 0.0 | 302.8 | 9.9e-15 | 7.3e-11 | 42.1 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 3 | Cadherin | 259 | 354 | 0.0 | 302.8 | 1.8e-16 | 1.3e-12 | 47.7 |
| pfu_aug2.0_85.1_16877.t1 | 5 | 2 | Cadherin_2 | 302 | 322 | 2.3e-16 | 59.1 | 0.023 | 170.0 | 1.8 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 4 | Cadherin | 377 | 464 | 0.0 | 302.8 | 1.7e-14 | 1.3e-10 | 41.4 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 5 | Cadherin | 479 | 568 | 0.0 | 302.8 | 7.8e-20 | 5.8e-16 | 58.5 |
| pfu_aug2.0_85.1_16877.t1 | 5 | 3 | Cadherin_2 | 483 | 541 | 2.3e-16 | 59.1 | 0.0097 | 72.0 | 3.0 |
| pfu_aug2.0_85.1_16877.t1 | 5 | 4 | Cadherin_2 | 583 | 644 | 2.3e-16 | 59.1 | 0.0063 | 47.0 | 3.6 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 6 | Cadherin | 584 | 673 | 0.0 | 302.8 | 1.3e-18 | 9.4e-15 | 54.6 |
| pfu_aug2.0_85.1_16877.t1 | 7 | 7 | Cadherin | 701 | 774 | 0.0 | 302.8 | 1.4e-14 | 1.1e-10 | 41.6 |
| pfu_aug2.0_85.1_16877.t1 | 5 | 5 | Cadherin_2 | 726 | 751 | 2.3e-16 | 59.1 | 0.1 | 740.0 | -0.2 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16877.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16877.t1 atgttagcaacagggatgcttttcccgactacagttttgtccgtcatttgtgtaacctttgtcggaactatttatgcaaa tgcacaactaactgcagaattctcagtgaaggaagaatccccaaagtcatttttggtcggaaacatagcgagtgcaagtg gacttcagatcagcacctctcccgcggacttcgcaacatttcggtacaatctcctagattcaccggacagcaattttcta ttcacagtaaacagaaggaatggcaacgtttacacagcgaagaaaatcgacagagaacgggaatgtggattaaaagaaac ttgtgccgtggacatgaaagtagctgttttctcaccagcactgtcaagattcgaagttgcttctgttcggattgttatag aggatgtcaatgataacaccccggttttcccgacaaacaaaatagatctgaaaatccctgagtcggctgtagttgggact tcttacaacatagactctgcaatggacagagattcatcatcattgttcgctgtaaacagttacattctttctcctgataa ttcgccatttcaacttaacgttacacatggaccggaggattccttactgccgtcattgatcctgaaacattccctggaca gagaaattaaaagtgactacaatttgacgatcacggcctatgacggaggtagcccaaagaaatcaggttctctgtctgtt agtatcaaagttttagatgaaaatgataacgcgcctgtttttaggaaaagtacatatgacctaagtgtggcagaaaatac gattccaggaacgtcactgatgcgtgtcagtgcaaaggatattgattctggtgacaacgccgatgtgcgctacagattcg gaaaaagacaagagagcttggacaaaatccaaaaatattttgatttggattcaaaaaccggtactatgactttgaaaaga gaaattgtgtatcgcagtggtgaaaccattcctatagaagtagatgcaatagacaacggacaaccgccacgtgtcggaca gacgacaattcttgtcaaggttgctgacgtaggaaataacccgccaaatgtagacattaatttcctatcgtctgcccaac caaacggagtgacaatatcagaaacgactagtgtcgggacactggtagcttttgtgacagtagaagaccttgacagcggt gataacggactggtcacttgttctctaaatgacacgacctttgtccttcagaggctggagagtgacggctacttgatagt gacacggtcttctctagatagggaatcaaatgatatgtattatgtcactttagagtgcaaggatcatggaacgccagaaa tggtgacattgacctcatttatagtcaaggtcaaggacgaaaacgacaataaaccaatattctctaaggacatctattac gctacagtcattgaaaataacagaataagcgaattcgtcacaaaagtttctgcaaaagattttgacatagatgagaacgc aaatataaagtactctgttcataaagatgcacaaggtcatgttaacattgattctaaaactggcatcatcaaggctatac gaaaatttgacagagaaataataaaccaatacaacttctcaatctatgcaactgatggaggaaaaccagctcagacggga agcgccacggttgtcatgacaatcggggacttgaatgataacgcaccagctttcaaagtagatactttccaattcttcgt acttgaaaacatggcatctggagtaaaagtaggacgcttgagtgccacggatgctgattttggtgttaatcagaacattt tatttaccgccgttgagggatcgctccagaaactaccgtttgcggtttatcaagatggaactgtgcgtacaacagaacaa ttggacagagaaatggtgaacagctattctttccttgttagagcatttgatctaggcattccatctttatcaagcacagc aactgtagtcgttcgagtagcagacgagaatgacaaccagccaatgattacttttcccgccaactcaaaccaaacgatca tcgtaccttttccagctaaccatggcaatgccttactacatattcaagctttcgatgtagatgaaaatggacctaacagt tatttgacgtacacaataatggagggaaatgaaatggatgtctttgagattaacgaaaattctggagcaatttacttgaa acagtttgttgacattttgaaagacgaaaaattcagactaaaaatttctgtaaaggataatggttacaatcgacatgaag caatgctggacataatcgtagttttaaagcggttcaatgaaacagaagcgcaagtttcaatggatgcagacagtcgaaat gcaatcgtcgtgacggcggtgataactttgatcatcatagggtgcgccactgtgatcactatcgtctgtatcgtaagaag aaatgcccagaaattaaagacacggaaacaaacggagatcgaatcaaacacacaagagctactaaaacagaaaagcttgt cagtgcctttcaaaaatgtatcttcaaccggaactacaacgacccacaacgaaaagatgaaatcgaaagtaagctttgca gacgacgaggacctgaggaatatggaattgtacaattcaacaggaacgtccatgtttacagacactctgatagaatctca gaaaatggtaacatcggcagaggaggaaagttactcagatgactctgctgcgcatgacagtggaagaggcggaagttacc tggatgtttatcagtgcaatcaagtaaagactttatgtacattcggtcccaaaccagtccaaggcaacggatctgcattt ccccattcatcaacattacaacacctggagatactgtga |
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Protein
| Protein ID | pfu_aug2.0_85.1_16877.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16877.t1 MLATGMLFPTTVLSVICVTFVGTIYANAQLTAEFSVKEESPKSFLVGNIASASGLQISTSPADFATFRYNLLDSPDSNFL FTVNRRNGNVYTAKKIDRERECGLKETCAVDMKVAVFSPALSRFEVASVRIVIEDVNDNTPVFPTNKIDLKIPESAVVGT SYNIDSAMDRDSSSLFAVNSYILSPDNSPFQLNVTHGPEDSLLPSLILKHSLDREIKSDYNLTITAYDGGSPKKSGSLSV SIKVLDENDNAPVFRKSTYDLSVAENTIPGTSLMRVSAKDIDSGDNADVRYRFGKRQESLDKIQKYFDLDSKTGTMTLKR EIVYRSGETIPIEVDAIDNGQPPRVGQTTILVKVADVGNNPPNVDINFLSSAQPNGVTISETTSVGTLVAFVTVEDLDSG DNGLVTCSLNDTTFVLQRLESDGYLIVTRSSLDRESNDMYYVTLECKDHGTPEMVTLTSFIVKVKDENDNKPIFSKDIYY ATVIENNRISEFVTKVSAKDFDIDENANIKYSVHKDAQGHVNIDSKTGIIKAIRKFDREIINQYNFSIYATDGGKPAQTG SATVVMTIGDLNDNAPAFKVDTFQFFVLENMASGVKVGRLSATDADFGVNQNILFTAVEGSLQKLPFAVYQDGTVRTTEQ LDREMVNSYSFLVRAFDLGIPSLSSTATVVVRVADENDNQPMITFPANSNQTIIVPFPANHGNALLHIQAFDVDENGPNS YLTYTIMEGNEMDVFEINENSGAIYLKQFVDILKDEKFRLKISVKDNGYNRHEAMLDIIVVLKRFNETEAQVSMDADSRN AIVVTAVITLIIIGCATVITIVCIVRRNAQKLKTRKQTEIESNTQELLKQKSLSVPFKNVSSTGTTTTHNEKMKSKVSFA DDEDLRNMELYNSTGTSMFTDTLIESQKMVTSAEEESYSDDSAAHDSGRGGSYLDVYQCNQVKTLCTFGPKPVQGNGSAF PHSSTLQHLEIL |
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