Gene
| Gene Model ID | pfu_aug2.0_85.1_16880 |
|---|---|
| Locus | scaffold85.1 : 248447 ... 266844 : + |
| To GenomeBrowser | scaffold85.1:248447..266844 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_2213.1_44286 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16880.t2 | 1 | 1 | MCM | 325 | 578 | 2.0e-18 | 66.2 | 4.9e-22 | 3.7e-18 | 65.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_85.1_16880.t2 | gi|390337836|ref|XP_003724653.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16880.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16880.t1 atgcaaagttgtacatcagacaaaaacttggatcttttgaaggctactgtagagtaccttgattgtagcggaaatttaaa gaatcttaaagatgtttgcaaaaactatcatttaagggacataaagacgttggtataccctttcaggattttcatagata taagtgccatttttgaactaaatgcatctcttggccatctcttgatcaaatcaccacccacagcaagtgctctctttcaa caggtaatctatttagctatagatacattggatctgcttccaagctttccctctataacacagatttctgttcacatcag acttacctcactgccaagactaaaaggaataaatgtcatccagtcattcaaagatttgataaggtgccaatcccagtatg tcagttttagcggcattgtcattggacagactgccacggcaaaatacacacagggtacacaatacatttgtcctgttgag gaatgtgagggacattcaggaaatcgctttgtacgtgtacatacaccaggtgcctctgaagtacaaatcatcaggaatga ttttacgtgtaccttctgtggggaatatctgaaggaagaaaagtcacaaagaattatagcagatagagtgctatgtgaaa tagtgcagaccaagtatctgtgtaattaccagtctttaagagatcaagcaattcctcttcatgtgagggatgacttggca tccttgatggaattaggtcaacattatgaagggattggtatcattaggacagatattaatagtgacaaaataattaaaac tatagaggtcaacaacattaaaaaggtagaatcacaacaagtaaaagaagttcctgaatcaatatgctcacttttgaaag atcatggtcacatgtttccatttgtaatggcatatttctttggtggccatatatgcccaccgggaacttacataaagctg aaattggcaataatactcagtctactatgtgacacacaggaaaaggacaggccattacatatcctggtaactggaaggga taccaacatcatccaaaaactgctaacctatggtcagagattcacgcagagagcatatgtccactcctgtggtcaagcac tgtctgccaaggttactaatgaccagtacataggagcaaaatatttcattgaaggaggttcattattacttgccagagaa ggaatttgttatattggtgaattgacaaaattcaaaaagtcagccagggatcaactcaagtcagttctaaacagtggcaa aatctcagttgacctggccagtaagttcacagatggactgcctcacacgatggagatacccaatcacagtcagatatggg catatacagaacccaacccccaggggaaatctcaacaatctgacgatgtcttcaatggatgtgattcaggggaaatctca aaagttcttttagattccttcagtattctacagtacacagatgtgtgtgatctgacaactacagaggaggtagcattaca cactgcacaccaaatcttacaagatgctattatagacgggaatcttatgtctatggaaaatgtgattagttatgaggatt tgaagcagtttatacagcatgccagaactctacgaccctctatgacatcagaagcagacaaactgatacagggatacttt attgcctctaggaaggccaggagctccaacaactcatctgctaatatgcccatgttagctctcccatcgtcactctgtcc tgagtgtattaccagctccccatgttccagccttacatatacaacagttcttctcagagttagagcagagtctgcagcga ttccatgtcaacttactgagattttgtacgacccagtcgtccagggaggaatgaagtcaaatgccagtcagacatcagtc ctatcaatacagagaacattgcaacaccttaccactggtactgtgaaataccacagatacatatgggaccttgccactct atgccataaccaaggaggacagaggactttttacaacatgtcacttactcctccatatttaacagcctggaatatcgctg taccaataataagtagcaatggcagacaaaccatcatccaacctacgccttcagcaaaaggcgggaaagagtaccgcccg tcatggcgatcataa |
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| Transcript ID | pfu_aug2.0_85.1_16880.t2 |
| Definition | - |
>pfu_aug2.0_85.1_16880.t2 atgcaaagttgtacatcagacaaaaacttggatcttttgaaggctactgtagagtaccttgattgtagcggaaatttaaa gaatcttaaagatgtttgcaaaaactatcatttaagggacataaagacgttggtataccctttcaggattttcatagata taagtgccatttttgaactaaatgcatctcttggccatctcttgatcaaatcaccacccacagcaagtgctctctttcaa caggtaatctatttagctatagatacattggatctgcttccaagctttccctctataacacagatttctgttcacatcag acttacctcactgccaagactaaaaggaataaatgtcatccagtcattcaaagatttgataaggtgccaatcccagtatg tcagttttagcggcattgtcattggacagactgccacggcaaaatacacacagggtacacaatacatttgtcctgttgag gaatgtgagggacattcaggaaatcgctttgtacgtgtacatacaccaggtgcctctgaagtacaaatcatcaggaatga ttttacgtgtaccttctgtggggaatatctgaaggaagaaaagtcacaaagaattatagcagttttgaatatgcataaaa tagtgctatgtgaaatagtgcagaccaagtatctgtgtaattaccagtctttaagagatcaagcaattcctcttcatgtg agggatgacttggcatccttgatggaattaggtcaacattatgaagggattggtatcattaggacagatattaatagtga caaaataattaaaactatagaggtcaacaacattaaaaaggtagaatcacaacaagtaaaagaagttcctgaatcaatat gctcacttttgaaagatcatggtcacatgtttccatttgtaatggcatatttctttggtggccatatatgcccaccggga acttacataaagctgaaattggcaataatactcagtctactatgtgacacacaggaaaaggacaggccattacatatcct ggtaactggaagggataccaacatcatccaaaaactgctaacctatggtcagagattcacgcagagagcatatgtccact cctgtggtcaagcactgtctgccaaggttactaatgaccagtacataggagcaaaatatttcattgaaggaggttcatta ttacttgccagagaaggaatttgttatattggtgaattgacaaaattcaaaaagtcagccagggatcaactcaagtcagt tctaaacagtggcaaaatctcagttgacctggccagtaagttcacagatggactgcctcacacgatggagatacccaatc acagtcagatatgggcatatacagaacccaacccccaggggaaatctcaacaatctgacgatgtcttcaatggatgtgat tcaggggaaatctcaaaagttcttttagattccttcagtattctacagtacacagatgtgtgtgatctgacaactacaga ggaggtagcattacacactgcacaccaaatcttacaagatgctattatagacgggaatcttatgtctatggaaaatgtga ttagttatgaggatttgaagcagtttatacagcatgccagaactctacgaccctctatgacatcagaagcagacaaactg atacagggatactttattgcctctaggaaggccaggagctccaacaactcatctgctaatatgcccatgttagctctccc atcgtcactctgtcctgagtgtattaccagctccccatgttccagccttacatatacaacagttcttctcagagttagag cagagtctgcagcgattccatgtcaacttactgagattttgtacgacccagtcgtccagggaggaatgaagtcaaatgcc agtcagacatcagtcctatcaatacagagaacattgcaacaccttaccactggtactgtgaaataccacagcagtgacaa attcttaattttgaattcatatggtgataatactaagtgtattcctcatttccctattctagttagagcagagtctacag cgattccatgtcaacttactgagattttgtatgacccagtcgtccagggaggaatgaagtcaaatgccagtcagacatca gtcctatcaatgcagagaatatcttaccactcgtactgtgaaatgccacaggtatga |
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Protein
| Protein ID | pfu_aug2.0_85.1_16880.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16880.t1 MQSCTSDKNLDLLKATVEYLDCSGNLKNLKDVCKNYHLRDIKTLVYPFRIFIDISAIFELNASLGHLLIKSPPTASALFQ QVIYLAIDTLDLLPSFPSITQISVHIRLTSLPRLKGINVIQSFKDLIRCQSQYVSFSGIVIGQTATAKYTQGTQYICPVE ECEGHSGNRFVRVHTPGASEVQIIRNDFTCTFCGEYLKEEKSQRIIADRVLCEIVQTKYLCNYQSLRDQAIPLHVRDDLA SLMELGQHYEGIGIIRTDINSDKIIKTIEVNNIKKVESQQVKEVPESICSLLKDHGHMFPFVMAYFFGGHICPPGTYIKL KLAIILSLLCDTQEKDRPLHILVTGRDTNIIQKLLTYGQRFTQRAYVHSCGQALSAKVTNDQYIGAKYFIEGGSLLLARE GICYIGELTKFKKSARDQLKSVLNSGKISVDLASKFTDGLPHTMEIPNHSQIWAYTEPNPQGKSQQSDDVFNGCDSGEIS KVLLDSFSILQYTDVCDLTTTEEVALHTAHQILQDAIIDGNLMSMENVISYEDLKQFIQHARTLRPSMTSEADKLIQGYF IASRKARSSNNSSANMPMLALPSSLCPECITSSPCSSLTYTTVLLRVRAESAAIPCQLTEILYDPVVQGGMKSNASQTSV LSIQRTLQHLTTGTVKYHRYIWDLATLCHNQGGQRTFYNMSLTPPYLTAWNIAVPIISSNGRQTIIQPTPSAKGGKEYRP SWRS |
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| Protein ID | pfu_aug2.0_85.1_16880.t2 |
| Definition | - |
>pfu_aug2.0_85.1_16880.t2 MQSCTSDKNLDLLKATVEYLDCSGNLKNLKDVCKNYHLRDIKTLVYPFRIFIDISAIFELNASLGHLLIKSPPTASALFQ QVIYLAIDTLDLLPSFPSITQISVHIRLTSLPRLKGINVIQSFKDLIRCQSQYVSFSGIVIGQTATAKYTQGTQYICPVE ECEGHSGNRFVRVHTPGASEVQIIRNDFTCTFCGEYLKEEKSQRIIAVLNMHKIVLCEIVQTKYLCNYQSLRDQAIPLHV RDDLASLMELGQHYEGIGIIRTDINSDKIIKTIEVNNIKKVESQQVKEVPESICSLLKDHGHMFPFVMAYFFGGHICPPG TYIKLKLAIILSLLCDTQEKDRPLHILVTGRDTNIIQKLLTYGQRFTQRAYVHSCGQALSAKVTNDQYIGAKYFIEGGSL LLAREGICYIGELTKFKKSARDQLKSVLNSGKISVDLASKFTDGLPHTMEIPNHSQIWAYTEPNPQGKSQQSDDVFNGCD SGEISKVLLDSFSILQYTDVCDLTTTEEVALHTAHQILQDAIIDGNLMSMENVISYEDLKQFIQHARTLRPSMTSEADKL IQGYFIASRKARSSNNSSANMPMLALPSSLCPECITSSPCSSLTYTTVLLRVRAESAAIPCQLTEILYDPVVQGGMKSNA SQTSVLSIQRTLQHLTTGTVKYHSSDKFLILNSYGDNTKCIPHFPILVRAESTAIPCQLTEILYDPVVQGGMKSNASQTS VLSMQRISYHSYCEMPQV |
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