Gene
| Gene Model ID | pfu_aug2.0_85.1_16885 |
|---|---|
| Locus | scaffold85.1 : 358974 ... 372687 : - |
| To GenomeBrowser | scaffold85.1:358974..372687 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_25542.1_62376 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16885.t1 | 4 | 1 | SH3_2 | 13 | 64 | 3.2e-35 | 119.3 | 4.0e-14 | 2.0e-10 | 40.0 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 1 | SH3_1 | 14 | 59 | 0.0 | 158.0 | 6.1e-16 | 3.0e-12 | 45.7 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 1 | SH3_9 | 15 | 63 | 0.0 | 168.3 | 6.5e-17 | 3.2e-13 | 49.0 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 2 | SH3_1 | 76 | 124 | 0.0 | 158.0 | 5.4e-12 | 2.6e-08 | 33.0 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 2 | SH3_9 | 77 | 129 | 0.0 | 168.3 | 4.8e-12 | 2.4e-08 | 33.4 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 2 | SH3_2 | 81 | 129 | 3.2e-35 | 119.3 | 1.8e-09 | 8.7e-06 | 25.1 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 3 | SH3_2 | 271 | 324 | 3.2e-35 | 119.3 | 1.7e-11 | 8.3e-08 | 31.6 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 3 | SH3_1 | 272 | 318 | 0.0 | 158.0 | 4.5e-16 | 2.2e-12 | 46.1 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 3 | SH3_9 | 273 | 323 | 0.0 | 168.3 | 3.7e-17 | 1.8e-13 | 49.7 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 4 | SH3_2 | 579 | 619 | 3.2e-35 | 119.3 | 1.3e-07 | 0.00064 | 19.1 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 4 | SH3_9 | 580 | 620 | 0.0 | 168.3 | 1.9e-12 | 9.3e-09 | 34.7 |
| pfu_aug2.0_85.1_16885.t1 | 4 | 4 | SH3_1 | 580 | 620 | 0.0 | 158.0 | 5.7e-12 | 2.8e-08 | 33.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_85.1_16885.t1 | gi|591345297|ref|XP_007097927.1| | PREDICTED: SH3 domain-containing RING finger protein 3 [Panthera tigris altaica] | 0.0 |
| pfu_aug2.0_85.1_16885.t1 | gi|671039308|ref|XP_008710462.1| | PREDICTED: SH3 domain-containing RING finger protein 3 [Ursus maritimus] | 0.0 |
| pfu_aug2.0_85.1_16885.t1 | gi|755710283|ref|XP_011279406.1| | PREDICTED: SH3 domain-containing RING finger protein 3, partial [Felis catus] | 0.0 |
| pfu_aug2.0_85.1_16885.t1 | gi|511889319|ref|XP_004764388.1| | 0.0 | |
| pfu_aug2.0_85.1_16885.t1 | gi|511889313|ref|XP_004764385.1| | PREDICTED: SH3 domain-containing RING finger protein 3 [Mustela putorius furo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16885.t1 atgtacatgtatggtttggtgggaaatcaaccctgtgcaaaggctttattcaattatgaaggaaaagatagtggggattt gtcattcaagaaaggagacatcataattttgaaaagacaagtagacgagaattggttccatggagagtttaatggtcaac atggattcttccctgcaacttatgtacaggagttagtccctttgcctgtgacaacacctcagtgcaaagctctgtatgat tttgactttgaaaatgaaaacgagaagaaagactgcctatgttttaaaaaggatgaaatccttactgtgataaaaagggt agacgataactggttagagggcaaaaaaggagataaatttggtatatttcctatttcttttgtcgagcttaacgatgcag caaaagctcttattcattccaagtcaagcagtatgcatgctgtatcaggtaaccatggcaatggtgatggcgctctttcc tccaccacaaatatgctaaatcccttagcatttgccggccaaattcctcagaagcgtcattcatttacagctacacctgt agaatcaaagccgtcttctgcaaacaagcattatagaaggtctttagagcttagtagtaaaggtaatttggtggcccttc ctctggtcactcaagcagaacaagtccccccacctgtgccgtcacaccacaatagtcatgcctcatccacaaataacagt tctttattatcagtgccatcaaccagtcaggctgcttcaacgagagtcccagattatgacgttgaacaacctggtccatc aaaccatcttgtcatagccatgtttaactacaagccgcaaaaagaagatgaactagagcttaagaaaggtgatcagtact cagtattagagatgtgccaagacggttggtataaaggccagtgtctcaaatcaacaaaaatgggagtgtttcctggaaat tatgtacagaaaactagagggccaagtgcattcagaccgatctcaaatgttcaaaacgtgagagccaagggccattcagc tccaggtgcttctagttctacgagtgcagaaggttcatctagtaaaggcaaacatcacttatcttatgctgtagagagac cgccagacagagaggccagaaaaagctcctctccagcaaggcaaagctctgcttctgtgaggagcagtgtgtctcctcaa aggtcctcacagaatgctcctcctgctatcacgccaaggtcatccaaaacttcatcagtaccaagtacatctacatcatc atctgtattatcgtctgcaacattgtcatctgctgctaatcataaatcaacatctgctacaaacagagcgccacctagtg gtgacaatcaaactcagcctcattctggtaaatcacatcactctagtgcttcatccatgcctgcatactcacgtaagggg aacaactcttcatcggctgatcaacatgtgttggtatcattatcctctgtacctcattccatgactgctactgccagtgg aggatcaaatggtacaagtattggtgctacaggtgaaacagtcccatctactagtaaagataagcaaaaagacaagaaag agaaggagaagatcagtttagtgaagagattagtatcctctggaaaaagcaaaaaatcaaaacctgtaaatgactcaaca ctagccgctgcagctttggacaaaaatactaaccatacaagattcaggtgtagagagccataccctcctcagagtgagat agaattagaactcaaagtaggtgacattgtgtttgtgtacaaaaagagagaggacggctggttcaagggaacactgcaga gaactggaaaaacaggagtgctggtaacatattatgaccttgacagtgcagatattccttacatataa |
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Protein
| Protein ID | pfu_aug2.0_85.1_16885.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16885.t1 MYMYGLVGNQPCAKALFNYEGKDSGDLSFKKGDIIILKRQVDENWFHGEFNGQHGFFPATYVQELVPLPVTTPQCKALYD FDFENENEKKDCLCFKKDEILTVIKRVDDNWLEGKKGDKFGIFPISFVELNDAAKALIHSKSSSMHAVSGNHGNGDGALS STTNMLNPLAFAGQIPQKRHSFTATPVESKPSSANKHYRRSLELSSKGNLVALPLVTQAEQVPPPVPSHHNSHASSTNNS SLLSVPSTSQAASTRVPDYDVEQPGPSNHLVIAMFNYKPQKEDELELKKGDQYSVLEMCQDGWYKGQCLKSTKMGVFPGN YVQKTRGPSAFRPISNVQNVRAKGHSAPGASSSTSAEGSSSKGKHHLSYAVERPPDREARKSSSPARQSSASVRSSVSPQ RSSQNAPPAITPRSSKTSSVPSTSTSSSVLSSATLSSAANHKSTSATNRAPPSGDNQTQPHSGKSHHSSASSMPAYSRKG NNSSSADQHVLVSLSSVPHSMTATASGGSNGTSIGATGETVPSTSKDKQKDKKEKEKISLVKRLVSSGKSKKSKPVNDST LAAAALDKNTNHTRFRCREPYPPQSEIELELKVGDIVFVYKKREDGWFKGTLQRTGKTGVLVTYYDLDSADIPYI |
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