Gene
| Gene Model ID | pfu_aug2.0_85.1_16887 |
|---|---|
| Locus | scaffold85.1 : 423808 ... 430880 : + |
| To GenomeBrowser | scaffold85.1:423808..430880 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_2315.1_30048 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| synaptotagmin 4 | GO:0005215 GO:0006810 GO:0008021 GO:0008152 GO:0016020 GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16887.t1 | 2 | 1 | C2 | 122 | 208 | 0.0 | 162.4 | 2.6e-25 | 2.0e-21 | 75.6 |
| pfu_aug2.0_85.1_16887.t1 | 2 | 2 | C2 | 256 | 344 | 0.0 | 162.4 | 4.5e-28 | 3.3e-24 | 84.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_85.1_16887.t1 | gi|676437144|ref|XP_009048108.1| | synaptotagmin 4 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_85.1_16887.t1 | gi|91091970|ref|XP_968583.1| | PREDICTED: synaptotagmin-11 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_85.1_16887.t1 | gi|242004456|ref|XP_002436307.1| | synaptotagmin, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_85.1_16887.t1 | gi|242016312|ref|XP_002428773.1| | synaptotagmin-4, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_85.1_16887.t1 | gi|391333947|ref|XP_003741371.1| | PREDICTED: synaptotagmin-4-like [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16887.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16887.t1 atgcgtaatgtacaaagtcgtctttctacagcaattaagaaaggactccaggatcctaatatcaaaagggcacccacatc tgtccgggatacgccaatgaagcatcacaaagctacaagtcccatccttccccctgaggcaggcccaaatgacaagctac cacaaacaccacagcattcactgctacctgagaaggaaccaggaaatacggggacggaggtcttctgtgaaaacgagaaa gagcaggttcagacaccgagcgagaaggacgaaagccaaagggagagacacgtggatgaaaaagaacataaacttggtaa tatccacttctctgtgcagtacgaaccacagaaacttgccatgatggtcaacataaaaagtatctctgaccttccaccac gtgatccaagtcttggcggatgcgatccctacataaagcttcagctacttccggagaagaaacacaagtgtaaaacaaga gtactgaggaaaacacagaaccccgtgtatgatgaaacctttaccttctatggaatcagtgagaatcagttggatggtat atctctacattttgtggtcctcagctttgatcgtttttctcgggatgaaatgattggcgaagtcgtttgtcctctacaga gcgtcgacattacagaaaaagaagtccccctttacaaagaaataaatcccaggcatttaaagttacgatgtgggggaagg ggagaacttttggtgtcattgtgttaccagcctgctgcaaacagactgacagtggtggtccttaaagccagaaatcttcc aaagatggacattactggattatcagatccttacgtaaagatatatctcctgtataacaaccagcgaatagcaaaaaaga aaacacatgtgaaaaaacggacgttgaacccagtgttcaacgaatccttcttgttcgacgttccgtacaacgagggactt cagaacataagcttggagtttctactccttgactgggaccgcatgactaaaaatgaggtcataggacgcttggacattgg aacaagaaccactggtcaagaactccatcattggaatgaggtcatgaactgtcctagaaagcaaattgcagagtggcata agctcagagagtga |
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Protein
| Protein ID | pfu_aug2.0_85.1_16887.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16887.t1 MRNVQSRLSTAIKKGLQDPNIKRAPTSVRDTPMKHHKATSPILPPEAGPNDKLPQTPQHSLLPEKEPGNTGTEVFCENEK EQVQTPSEKDESQRERHVDEKEHKLGNIHFSVQYEPQKLAMMVNIKSISDLPPRDPSLGGCDPYIKLQLLPEKKHKCKTR VLRKTQNPVYDETFTFYGISENQLDGISLHFVVLSFDRFSRDEMIGEVVCPLQSVDITEKEVPLYKEINPRHLKLRCGGR GELLVSLCYQPAANRLTVVVLKARNLPKMDITGLSDPYVKIYLLYNNQRIAKKKTHVKKRTLNPVFNESFLFDVPYNEGL QNISLEFLLLDWDRMTKNEVIGRLDIGTRTTGQELHHWNEVMNCPRKQIAEWHKLRE |
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