Gene
| Gene Model ID | pfu_aug2.0_85.1_16889 |
|---|---|
| Locus | scaffold85.1 : 475675 ... 500303 : - |
| To GenomeBrowser | scaffold85.1:475675..500303 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_1391.1_07931 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 2010321m09rik protein | GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16889.t1 | 1 | 1 | DUF4066 | 8 | 131 | 6.5e-14 | 51.5 | 1.3e-17 | 9.4e-14 | 51.0 |
| pfu_aug2.0_85.1_16889.t1 | 2 | 1 | DJ-1_PfpI | 31 | 131 | 6.5e-21 | 74.3 | 1.7e-24 | 1.2e-20 | 73.4 |
| pfu_aug2.0_85.1_16889.t1 | 2 | 2 | DJ-1_PfpI | 184 | 220 | 6.5e-21 | 74.3 | 0.69 | 5100.0 | -3.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_85.1_16889.t1 | gi|676477793|ref|XP_009061219.1| | hypothetical protein LOTGIDRAFT_206942 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_85.1_16889.t1 | gi|149041968|gb|EDL95809.1| | similar to 2010321M09Rik protein [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_85.1_16889.t1 | gi|597770866|ref|XP_007249224.1| | PREDICTED: von Willebrand factor A domain-containing protein 9 [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_85.1_16889.t1 | gi|704567928|ref|XP_010184517.1| | PREDICTED: von Willebrand factor A domain-containing protein 9, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_85.1_16889.t1 | gi|573881193|ref|XP_006628794.1| | PREDICTED: von Willebrand factor A domain-containing protein 9-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16889.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16889.t1 atgccttcggccgttgtcattctcgctgaaggtgcagaggagatggagacagttataacagttgatgttctaaggagagg agagattgatgtaaccttagcagggctagcaggaagtgacccagtaacctgtagtcgcaatgttaagatcgtgcctgact gtagccttgatgatgccgtaaagaaaggtccgtatgatgtagttgtgtgtccagggggaggaaaaggtgccgaaaacctg ggagagtccagcaaagtaaaagaattactttcaagtcaagaaaaagagggcaggttaatcgctgcagtctgtgcagctcc cactgctttgaataaacatggaatagctaaaggtagtacagtgacatcacacccctctgttaaagataaactcactgata acatatcatttaactgttgttgctatggtctgttggttaagccaaaggagtttgactgtctgcatgagtttgatcatata aagaaggaagtatcgagttctctggaggttatgggttttattgagatcggtgatgctgctagtccacagaccctctcccg ccatcttgttctgcctttaccgtctaaagattcaaaaatcagctcagattccagtgagaagaaagagaaggaggaggagg atgaaacgtcagtagatgaagggaaaactccagcatttactgtcctgttacatggaagtcttaaagtggaaggaatggtg gcactcactaaactagcagaggactggtatggaatcttatactcttgggctgacagcaaaaagaagagcaatctcatgtt atcaatacttcaaccaggtcctgaaccaataagttggcttggaaatattcataacttggcaccaatttctgattttattg agccaccatatggagaagatgataataaaacaccatttccaatcagaccacaggacaaacgtagttatgctcagagttgt gttgtgtggattaaaccaatgggattgcagctcgccgggacgaaaaagtctggagagctaatgccataccgtcggcgtcg ttgtcgtcgtcgtcatcagtag |
|
Protein
| Protein ID | pfu_aug2.0_85.1_16889.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16889.t1 MPSAVVILAEGAEEMETVITVDVLRRGEIDVTLAGLAGSDPVTCSRNVKIVPDCSLDDAVKKGPYDVVVCPGGGKGAENL GESSKVKELLSSQEKEGRLIAAVCAAPTALNKHGIAKGSTVTSHPSVKDKLTDNISFNCCCYGLLVKPKEFDCLHEFDHI KKEVSSSLEVMGFIEIGDAASPQTLSRHLVLPLPSKDSKISSDSSEKKEKEEEDETSVDEGKTPAFTVLLHGSLKVEGMV ALTKLAEDWYGILYSWADSKKKSNLMLSILQPGPEPISWLGNIHNLAPISDFIEPPYGEDDNKTPFPIRPQDKRSYAQSC VVWIKPMGLQLAGTKKSGELMPYRRRRCRRRHQ |
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