Gene
| Gene Model ID | pfu_aug2.0_85.1_16890 |
|---|---|
| Locus | scaffold85.1 : 500484 ... 528159 : + |
| To GenomeBrowser | scaffold85.1:500484..528159 |
| Genes list of scaffold | scaffold85.1 |
| Synonym | pfu_aug1.0_1391.1_07929 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_85.1_16890.t1 | 2 | 1 | FHA | 20 | 86 | 7.1e-15 | 54.8 | 3.7e-18 | 2.8e-14 | 52.9 |
| pfu_aug2.0_85.1_16890.t1 | 2 | 2 | FHA | 225 | 242 | 7.1e-15 | 54.8 | 0.71 | 5300.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_85.1_16890.t1 | gi|524885420|ref|XP_005099318.1| | PREDICTED: forkhead-associated domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_85.1_16890.t1 | gi|676426807|ref|XP_009044742.1| | hypothetical protein LOTGIDRAFT_237318 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_85.1_16890.t1 | gi|260831822|ref|XP_002610857.1| | hypothetical protein BRAFLDRAFT_127466 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_85.1_16890.t1 | gi|585700469|ref|XP_006812789.1| | PREDICTED: forkhead-associated domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_85.1_16890.t1 | gi|390358298|ref|XP_003729225.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_85.1_16890.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16890.t1 atgaaagcattcctgaaaggaggtgacggtggtttatttcaattatcacctaagttaacgactgtcggccgtgacggttg tgacattaatttacagactcatggactggatgtacaacatgcagtgatagagtataatgagcaagaagactgctatgtct tacaggaccttaacacggcacaggggacgtatgtcaacgactgtcgtatacagaacgctgtggtacgtctcgctccgggt gatgttatcaagtttggatatggtggagttccacatgagctaattatagaaaatccacctccgatttcctacccgcccgt ccagcaaagaccagcctttacccagcccctgacgctgttgtcagagactctggggtacacccagtctaacaccaacgcct ttggatccacccctacaacccagagtaattataacgcctccctcccttacctagccactgccacagccaccatcacaatc ccctccaccgtatggacgcctaacaatgaccgcctggcctccatgccacgcccccctcccccgacccttcgggcacgccc cctcagtgcggggtcgaacaggaggatggggtctacgtatgacagagtaacgacggtggggggaagtcctgtcaactctc cacagatgcagaggagtgtttgtatgacaaataattgggtgaatggacgtacagtcactccacaacagacggtacagaat acagacatacagaaaatacaagaaaaggagcagaaaatccttcagttaacagacgagtgtaccagactgcgcggcgtgga ggtggaatcgttcaggaaagacgctcatatccagacgttacaacagacgataatggacatgcaacaacgaatgagcacgc agccgccacttatgatgggacaagacgtagacctgactcagaaactcgtacagctagaacacgaactcacggctaaacaa nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnncaagaaatttcagctctacgggaacagctccttcatcagacggatacaaat gtctcgtctgttaccgaggtaacggagtcaaaggaattaaacaccatgaaaaacgaattagaacgagctaaaaaggataa aaatatcacgtctggtttaataactcaaatgcagaaagacatgtccaataaagattccaccattagtaaattaacgagag aaattgaaattctcaagaaagaaataagagagagggatatacagattactgccatgtccaaaaagatgtccagaactacc gatactccattaaaggcatcagaggagagagacgctagagaaaaggagctgatcagcttacgtcagaaattcaaggccac cgagagtaagatgcaggatcaacaggagttaataactcagctcaaacaggaactcgagaaatctaaactcagtttgtacg aggagaaaaatgtacagaagaaaatccagtcagaagtggacggagccaaggcggagcttatagatctacagagggcggaa cgagttgtcagggtcgacttagaacaagctacaaagaggcttgaaaggttcaggaatcgtgtcgtacaaacggcatttgc aactcccggaatcaaggctccagacggggaaatcagcgacgacgaactcttagaaactctgaagaaacttatcgacgaga ggacggaattccatcgtaagatgagcgaaatggaacagcagctaaaactaacggacagcagtagtaacgtgttcaaacga aatatgtccaaactacgcagtgaactagaacaagcagtcaataatctgaagtcaggtggtttcttggcgggcacagtcaa acaggaagtggcattactacaagccgtgagcggagatgagtccgtgatctggatgagagactgtcttattaacctcctta atagtgcaatgacatgggaacaaaatatagagtcgtcgttagaggcctgtggtgttaatatcaaactttcgaatgattct cctggacagcatattaaacatcttttcgcaaaatgggaatcagcaatcaaggagaaagagaaactacaagctcaagtatc tgagatccaagaaaagttcaaagctgaccttgaaatgcaggtcaaggtcgtgactgaggatggagagaacaaggtcaagg acgcactggaaaaggcaaggatagaagctgaagaaaaattacacaaggcaatagaagagatcaaggtgatagaagccgag aaattagaaaacgctgtcgatcaggagagagctaaaatagaacagctagagacgaccatcaacgaactgaaagagctcat tgttgtcttaaggaaagagaacagtgagttgaaaaacaagttacagagtcaagatgacctgatactcgggttaagacgtg atctagccggtgctcatgccagtctctctgatatcacaggggagttaagcgagtctcagaaacaagaaattgagaagaac aaagttctaatcgtacagaaagataaagatatcatggaaatacgacaacagatggcaaagctctccaaaatcatcgacaa acagaaatctgacatcaaatctctggaaattcaactcagtgaagagaaatccatatcagtcaaatacaaagcagtattag atgagaagaaccagaaaatacaacaactagaaatcttactggagagagaaaaacaagaacagaaaaaacagttagagcta ctggatcaggaggggcggataacttctgagatgacagctttaggagcacagtgtcgtggtgaacgtcatgagcaagtcat atcacgtcagagagaggctctgtccgaacttagaaccagaattagatctttggagcagtctaaaccaccactgcccaccc aggatcaagccttacagcaggttttgatgttgaagaaggaactagcggagatgaaggcaaaccaagcactagccgaggac actagcttatcgtctggagtggagagagaggtgtcgcgagccaggggcatgctgggaagtgttaacgctgaagctgatat ggaacgcagtgctcacagagagacactggatgccttggatgctagtgaaagctcatatctaacattattgagggcattag ccagctgtctagagttggaacatgtggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatggcttacgtccgattggtcacatacccaaagacgagagagaaaggc tattaatagaacgcgagaacagttgtcagttattatcaacgagggttaaagctctacatgagaggataaagaggaaggag gagttactacagggttacgagagagatctcgctaaaatgagacaagctcaggaactggcctcaaagaaagctacacaagt tgaaagtctcgcaaatgatgtgaagagcaggacagaggaaactcagtatctcagagaatctctaagtcgaacgcgagatc gcttagatcaggaaaaacggctaaataaagccattaaacagaaaaagggtatggaaagacaggcagaaatcattgagagc tag |
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Protein
| Protein ID | pfu_aug2.0_85.1_16890.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_85.1_16890.t1 MKAFLKGGDGGLFQLSPKLTTVGRDGCDINLQTHGLDVQHAVIEYNEQEDCYVLQDLNTAQGTYVNDCRIQNAVVRLAPG DVIKFGYGGVPHELIIENPPPISYPPVQQRPAFTQPLTLLSETLGYTQSNTNAFGSTPTTQSNYNASLPYLATATATITI PSTVWTPNNDRLASMPRPPPPTLRARPLSAGSNRRMGSTYDRVTTVGGSPVNSPQMQRSVCMTNNWVNGRTVTPQQTVQN TDIQKIQEKEQKILQLTDECTRLRGVEVESFRKDAHIQTLQQTIMDMQQRMSTQPPLMMGQDVDLTQKLVQLEHELTAKQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEISALREQLLHQTDTN VSSVTEVTESKELNTMKNELERAKKDKNITSGLITQMQKDMSNKDSTISKLTREIEILKKEIRERDIQITAMSKKMSRTT DTPLKASEERDAREKELISLRQKFKATESKMQDQQELITQLKQELEKSKLSLYEEKNVQKKIQSEVDGAKAELIDLQRAE RVVRVDLEQATKRLERFRNRVVQTAFATPGIKAPDGEISDDELLETLKKLIDERTEFHRKMSEMEQQLKLTDSSSNVFKR NMSKLRSELEQAVNNLKSGGFLAGTVKQEVALLQAVSGDESVIWMRDCLINLLNSAMTWEQNIESSLEACGVNIKLSNDS PGQHIKHLFAKWESAIKEKEKLQAQVSEIQEKFKADLEMQVKVVTEDGENKVKDALEKARIEAEEKLHKAIEEIKVIEAE KLENAVDQERAKIEQLETTINELKELIVVLRKENSELKNKLQSQDDLILGLRRDLAGAHASLSDITGELSESQKQEIEKN KVLIVQKDKDIMEIRQQMAKLSKIIDKQKSDIKSLEIQLSEEKSISVKYKAVLDEKNQKIQQLEILLEREKQEQKKQLEL LDQEGRITSEMTALGAQCRGERHEQVISRQREALSELRTRIRSLEQSKPPLPTQDQALQQVLMLKKELAEMKANQALAED TSLSSGVEREVSRARGMLGSVNAEADMERSAHRETLDALDASESSYLTLLRALASCLELEHVXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLRPIGHIPKDERERLLIERENSCQLLSTRVKALHERIKRKE ELLQGYERDLAKMRQAQELASKKATQVESLANDVKSRTEETQYLRESLSRTRDRLDQEKRLNKAIKQKKGMERQAEIIES |
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