Gene
| Gene Model ID | pfu_aug2.0_8504.1_16328 |
|---|---|
| Locus | scaffold8504.1 : 1 ... 5955 : - |
| To GenomeBrowser | scaffold8504.1:1..5955 |
| Genes list of scaffold | scaffold8504.1 |
| Synonym | pfu_aug1.0_62230.1_70938 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcyphosin-like protein | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_8504.1_16328.t1 | 2 | 1 | EF-hand_7 | 46 | 103 | 5.0e-14 | 52.1 | 1.4e-12 | 3.0e-09 | 36.8 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 1 | EF-hand_1 | 49 | 71 | 1.1e-18 | 65.0 | 1.3e-05 | 0.028 | 13.7 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 1 | EF-hand_5 | 49 | 68 | 3.4e-13 | 48.2 | 0.0025 | 5.2 | 6.5 |
| pfu_aug2.0_8504.1_16328.t1 | 4 | 1 | EF-hand_6 | 50 | 72 | 6.6e-18 | 62.9 | 4.7e-05 | 0.1 | 12.5 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 1 | EF-hand_8 | 50 | 70 | 8.6e-07 | 28.4 | 0.15 | 310.0 | 1.0 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 2 | EF-hand_8 | 64 | 103 | 8.6e-07 | 28.4 | 8.5e-09 | 1.8e-05 | 24.2 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 2 | EF-hand_1 | 82 | 107 | 1.1e-18 | 65.0 | 3.2e-11 | 6.7e-08 | 31.2 |
| pfu_aug2.0_8504.1_16328.t1 | 4 | 2 | EF-hand_6 | 83 | 107 | 6.6e-18 | 62.9 | 2.9e-09 | 6.2e-06 | 25.6 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 2 | EF-hand_5 | 84 | 102 | 3.4e-13 | 48.2 | 7.6e-09 | 1.6e-05 | 24.0 |
| pfu_aug2.0_8504.1_16328.t1 | 2 | 2 | EF-hand_7 | 117 | 139 | 5.0e-14 | 52.1 | 2.6e-05 | 0.056 | 13.5 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 3 | EF-hand_1 | 118 | 141 | 1.1e-18 | 65.0 | 1.0e-06 | 0.0021 | 17.2 |
| pfu_aug2.0_8504.1_16328.t1 | 4 | 3 | EF-hand_6 | 118 | 143 | 6.6e-18 | 62.9 | 2.7e-08 | 5.6e-05 | 22.6 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 3 | EF-hand_5 | 119 | 140 | 3.4e-13 | 48.2 | 1.6e-06 | 0.0034 | 16.6 |
| pfu_aug2.0_8504.1_16328.t1 | 3 | 3 | EF-hand_8 | 122 | 139 | 8.6e-07 | 28.4 | 0.019 | 40.0 | 3.9 |
| pfu_aug2.0_8504.1_16328.t1 | 4 | 4 | EF-hand_6 | 152 | 161 | 6.6e-18 | 62.9 | 2.7 | 5700.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_8504.1_16328.t1 | gi|347921637|ref|NP_001017776.2| | calcyphosin-like protein [Danio rerio] | 0.0 |
| pfu_aug2.0_8504.1_16328.t1 | gi|528513515|ref|XP_005161233.1| | PREDICTED: calcyphosin-like protein isoform X1 [Danio rerio] | 0.0 |
| pfu_aug2.0_8504.1_16328.t1 | gi|156360023|ref|XP_001625061.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_8504.1_16328.t1 | gi|507537077|ref|XP_004652567.1| | PREDICTED: calcyphosin-like protein [Jaculus jaculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_8504.1_16328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8504.1_16328.t1 atggcagccacgagcagaaacaaccgggaactaatgcagaaatgtcagaagaagttaaattcgggggaagacatagaccc tgtggaaagattacggttgcaatgtctgtccagaggagctagcggtatcaagggtttaggaagatcctttagaatcatgg atgatgatagtgataggagtctcagcattagtgaattcaagaaaggtttacacgattatggagtggatgtggaaggcaat gtagcacaagaaatatttagtagaattgacaaggatggcagtggccaattatcttttgatgaatttttgatggcattaag gccaccaatgaacaaaaatagaaagggtctaataattaaggctttccacaagctagacaagactggtgatggagtagtta ctgtggaggatctgcagggagtttataatgtgaaaaaacacaaaaaatatatcagtggagagtggactgaggatcaatgc ttgaaagaatttttaga |
|
Protein
| Protein ID | pfu_aug2.0_8504.1_16328.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_8504.1_16328.t1 MAATSRNNRELMQKCQKKLNSGEDIDPVERLRLQCLSRGASGIKGLGRSFRIMDDDSDRSLSISEFKKGLHDYGVDVEGN VAQEIFSRIDKDGSGQLSFDEFLMALRPPMNKNRKGLIIKAFHKLDKTGDGVVTVEDLQGVYNVKKHKKYISGEWTEDQC LKEFL |
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