Gene
| Gene Model ID | pfu_aug2.0_852.1_07949 |
|---|---|
| Locus | scaffold852.1 : 1 ... 8869 : + |
| To GenomeBrowser | scaffold852.1:1..8869 |
| Genes list of scaffold | scaffold852.1 |
| Synonym | pfu_aug1.0_12264.1_03215 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tubulin-specific chaperone a | GO:0005488 GO:0015630 GO:0044446 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_852.1_07949.t1 | 1 | 1 | TBCA | 1 | 79 | 1.9e-23 | 82.3 | 3.0e-26 | 2.5e-23 | 81.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_852.1_07949.t1 | gi|676436424|ref|XP_009047878.1| | hypothetical protein LOTGIDRAFT_212782 [Lottia gigantea] | 4.0e-31 |
| pfu_aug2.0_852.1_07949.t1 | gi|524869987|ref|XP_005091780.1| | PREDICTED: tubulin-specific chaperone A-like [Aplysia californica] | 8.0e-28 |
| pfu_aug2.0_852.1_07949.t1 | gi|556966748|ref|XP_005992692.1| | PREDICTED: tubulin-specific chaperone A [Latimeria chalumnae] | 6.0e-25 |
| pfu_aug2.0_852.1_07949.t1 | gi|260829667|ref|XP_002609783.1| | hypothetical protein BRAFLDRAFT_264942 [Branchiostoma floridae] | 4.0e-24 |
| pfu_aug2.0_852.1_07949.t1 | gi|297675531|ref|XP_002815728.1| | PREDICTED: tubulin-specific chaperone A [Pongo abelii] | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_852.1_07949.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_852.1_07949.t1 gcttgccaaggagaaatgttcatatgagaaagaaattacaagtacagaggaaaaaatagaaaagatgaaagcagaaggga aagatgaatatgacatcaagaaaatgaatgaagttctacaggagtccaaaatgatggtgccagatgctatgaacagattg agaaaggcatatgatgatttggaacaaactttggagaaggaaaaagatttaaatgaatcagaggaatacaaagctgcaca aacagccctagaagacggcaaaaaggtcctggaggtttcataa |
|
Protein
| Protein ID | pfu_aug2.0_852.1_07949.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_852.1_07949.t1 LAKEKCSYEKEITSTEEKIEKMKAEGKDEYDIKKMNEVLQESKMMVPDAMNRLRKAYDDLEQTLEKEKDLNESEEYKAAQ TALEDGKKVLEVS |
|