Gene
| Gene Model ID | pfu_aug2.0_853.1_11237 |
|---|---|
| Locus | scaffold853.1 : 1 ... 13705 : - |
| To GenomeBrowser | scaffold853.1:1..13705 |
| Genes list of scaffold | scaffold853.1 |
| Synonym | pfu_aug1.0_301714.1_28817 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_853.1_11237.t1 | 4 | 1 | TSP_1 | 14 | 26 | 2.5e-20 | 72.2 | 2.0 | 15000.0 | -5.2 |
| pfu_aug2.0_853.1_11237.t1 | 4 | 2 | TSP_1 | 82 | 133 | 2.5e-20 | 72.2 | 5.4e-11 | 4.0e-07 | 30.0 |
| pfu_aug2.0_853.1_11237.t1 | 4 | 3 | TSP_1 | 139 | 191 | 2.5e-20 | 72.2 | 1.5e-06 | 0.011 | 15.7 |
| pfu_aug2.0_853.1_11237.t1 | 4 | 4 | TSP_1 | 198 | 249 | 2.5e-20 | 72.2 | 2.9e-16 | 2.2e-12 | 46.8 |
Transcript
| Transcript ID | pfu_aug2.0_853.1_11237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_853.1_11237.t1 atggtgtcttctacacgtgtgaagcatcagaggtgtggtccatgtgggaggagtggagcgcatgctcggcgagttgtgag ggggtcaggagccgggtgtctcactgctgtcctgaagtctgtgacacgtcaaaatcagaaacggaaaattgtaactctcc ctgtcctgagtgttaaactgagaggaaccgttacggttggtaatgtcgttctaatatattcctccctagttgacggtggt tggtcagagtgggttcccgctgaccagtgttcccgttcctgtggtaatgatggtgtacaaacatggacgaggaactgtcc agaaccagaaccggcgaatggtggacagacttgtaccggggagaaaagcgaaacaagggcctgtaatgtggtaccttgtc cagttgacggcagctggtctgaatgggcgtcttccggtgattgttcccagtcatgtggtaatcagagtgtacagatgtgg actagggactgtacagacccaccaccggcatacggaggatatgactgtattggtcctctctacgaaacaagagaatgctt tgtctcgccatgtccagttgacggaggttggtcaacatggtcgtcgtacagcgcatgctcagtcacgtgtggaaacggaa cacaagagaggagtcgtgagtgttcgaatccaagtccccaatacggcggtgctgattgtcatggaaacaaatcagaacac acgatttgcatcactaacatcaaatgtgaagatccagtaaacctggtaggatgccactgtgaatgcaaagatgatggtga aactgatataacgatcgacgaaaagataaaatccattgtggaccacctcagtgtgaaaaaatccgagctctcctctacaa aaaatcagaaaattagcgcctctgatccccgcctgtcctcggctaggataggctatgttggggccttatttataggcgcc gtggggaaaatgaattgtcatagtgctctactaatcaacatcgtcggaattatcatctatttctatggattatcatgcgc acaggaatcacagacaacctacgtaggcaaaggtgtaccggtcaggattaatggcagagatttccagctgtttactctac ctgatggcaagagagtcttaatgctggtgacgcaagacggagggcaacaaaaagtacagactattagcaatgtcagaaca agcggaaacagcgcggaaaatgttaaatatagaaagttaccgggagaaaagcgaaaagtgttgtttaagattcaaagaca actaacaaaaatattgaaaagacgaataaatccaaggaaataccggcttataacaagtacagatggaataccacgtctcg ctttgaatagaagacgaagaggcggattaactttcgaaaatatccgaaaacttataaaacttataaacagctacttgcta cgtggaattccctataacgacaacactagaatagatgaacgaacagaacagaatattgtgctggatacaaagattctaac acataaccaaattgttcaaacggaaggtcccattaacaaaataaatgatgagaacgttcgaacaaagatcaaatctgtca aaattaatcaaactttacctttgaagcaagaattgcataaagaaaatattattgacaagctgcataaggaggaaaaagac attttgaatacactctcttcgctaacaccaaagaaaacaacgacggaatctgtaatgacaaaactgaaagtcgaggaaaa acaaatcatatctgatttgcaagctttaaatacggcagcagcgcaatcattaactacctcaaaaataaaaccaacacaag ctcctgtgaaaaacatcaccacattagactcggtgttaata |
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Protein
| Protein ID | pfu_aug2.0_853.1_11237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_853.1_11237.t1 MVSSTRVKHQRCGPCGRSGAHARRVVRGSGAGCLTAVLKSVTRQNQKRKIVTLPVLSVKLRGTVTVGNVVLIYSSLVDGG WSEWVPADQCSRSCGNDGVQTWTRNCPEPEPANGGQTCTGEKSETRACNVVPCPVDGSWSEWASSGDCSQSCGNQSVQMW TRDCTDPPPAYGGYDCIGPLYETRECFVSPCPVDGGWSTWSSYSACSVTCGNGTQERSRECSNPSPQYGGADCHGNKSEH TICITNIKCEDPVNLVGCHCECKDDGETDITIDEKIKSIVDHLSVKKSELSSTKNQKISASDPRLSSARIGYVGALFIGA VGKMNCHSALLINIVGIIIYFYGLSCAQESQTTYVGKGVPVRINGRDFQLFTLPDGKRVLMLVTQDGGQQKVQTISNVRT SGNSAENVKYRKLPGEKRKVLFKIQRQLTKILKRRINPRKYRLITSTDGIPRLALNRRRRGGLTFENIRKLIKLINSYLL RGIPYNDNTRIDERTEQNIVLDTKILTHNQIVQTEGPINKINDENVRTKIKSVKINQTLPLKQELHKENIIDKLHKEEKD ILNTLSSLTPKKTTTESVMTKLKVEEKQIISDLQALNTAAAQSLTTSKIKPTQAPVKNITTLDSVLI |
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