Gene
| Gene Model ID | pfu_aug2.0_857.1_24473 |
|---|---|
| Locus | scaffold857.1 : 125010 ... 176116 : + |
| To GenomeBrowser | scaffold857.1:125010..176116 |
| Genes list of scaffold | scaffold857.1 |
| Synonym | pfu_aug1.0_2717.1_30233 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_857.1_24473.t1 | 2 | 1 | Lectin_C | 208 | 308 | 4.9e-08 | 33.5 | 7.7e-10 | 2.3e-06 | 28.2 |
| pfu_aug2.0_857.1_24473.t1 | 2 | 2 | Lectin_C | 385 | 416 | 4.9e-08 | 33.5 | 0.07 | 210.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_857.1_24473.t1 | gi|755988398|ref|XP_011311833.1| | PREDICTED: zonadhesin-like [Fopius arisanus] | 2.0e-17 |
| pfu_aug2.0_857.1_24473.t1 | gi|426228532|ref|XP_004008357.1| | 3.0e-17 | |
| pfu_aug2.0_857.1_24473.t1 | gi|742246262|ref|XP_010864742.1| | PREDICTED: target of Nesh-SH3, partial [Esox lucius] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_857.1_24473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_857.1_24473.t1 atggtagcatcaagtttgatattccgaagcttccttataatcttaattggtataacagaagatgagcggggcgttttatt tgctaaggaaatcaatctgcaaaatgaaatgatgttgtgtaatgtgtttctcggtgggaaggagaaggtgaacgtatcca gagtgtttgaaatgcaccaaatggaagatttgaatggagatgggaatgtccaattcaatgaattcttccttggattacat aaacgtgctcgcaatgtcagtatggagtattatgaggaattgtttgatcttcttaatctgaattcgactggaaaggaaca ttacacacttgaagaacataaagctaatttcctcaaggctgatgaagatggtgaccgtgacggaaccataaacatggctg aatgtgtggaatatcttacaaagcgtgctagcaatgtcagtatgaaatttgataaagaatggtttcatcttctcaaccta aattcaactggaaagaaagagtacacacataacgaaaacttggaaaatttcttcgatgcagatgatgatcccacatgtca gcatacagcggatttgaatatagagcttcttgataattgttacctaggctatggcaatgatgaaacattcgactatgcac atgcgcactgtgcgtccatgggatttcatttggttttcttggagacattacaggaggagcaatggttgatggacatggtt gacaatcagaattttaaagacagattttggataggagccatacaggtgcatactggagagtggcagtggggaaacggtgt gcctatacatcatgccagaatgaccgatccttttacaaatgagattcatgcagttatcaaaaatgatattggacaaaata tagacccacgtgatatttccaacaaggatgcttatatatgcgagctagcaggcgcaacgccagtaccaagcaatagccca agtacattaccaccaccatcaccaccaccaccaccttcgacaggtgcaacgccagtaccaagtaatagcccaagtacgtt acccccgccatcaccaccaccaccaccttcgacaggaccatgcctcttggtgtcagatctgaccataccgacactgacca attgttatttgaccttccttcaagtcgatgatcacaacaacgcatttgagcattgtaagttcttgggatttcatttggtc ttcttggagacgtttcaagagcagatatggctccaaaatcaattaacaggtattgcagaatggcagtgggacaacggcgt tttgattcacaatggcaggatacaggaccctttttcaaaccatttgcacgcccttttgccaaagattgaaggaattcctt tggaacctcagtatggaattcatgaatttccttacatctgtgaatttgcaggatcaacatatgaccctagtacaatacct acagtgtcaccaactctcccgtatccaagtacagtcacccatccgtcaccgacagtaccttatccgagtacagtccctta tccgtcgccaagtacaatccaaaattcgtcaccgacagttccttatcagagtacagtgactcatccgcttacgacagttc cttacccaagtacagtcactcatccgtcaccgacagtttcttatccaagtacagtcactcaaccgtcaccgacagttcct tatccgagtacagtgactcatctgtcaccgatagtcccttatccaagtacagtcactcatccgtcaccgacagtttctta tccaagtacagtaaaccatccgtcaccgacagttcctaatccgagtacagtcaacaatccgtcaccaactgttccgtatc caagtacagtgactcatccgtcaccgacagctccttatccaattcataatccgagtacagtcaacaatccgtcaccaact gttccgtatccaagtacagtcactcattcgtcaccgacaattccttttccaagtacagtcactcatccgtcatcgacagt tcctaatccgagtacagtcaacaatccgtcacctactgttccttatgcaagtacagtccctaatccgtcaccgacagttc catacccaagtacagtcactcattcgtcatcgacagtttcttatccaactacagtcacccatccgtcatcgacagttcct tatccgagtacagccgctcatccgtcatcgacagttccttatccgagtacagtcactaatccgtcgccttcagttccata tccaagcacaggcacccaaccgtcatcggcagtttcgtatccaagtacagtgactaatccgtcacccacagttcctaatc caagtacagttacttatccgtcaccgacagttacttatccaaatacaatccaaaatccgtcatcgacagttacttatccc agtacagtcactcatccgtcaccgacagttcctcacctaagtacagtcactcatccatcaccgacagtttcttatccaag tacagtcactcaaccgtcaccgacagttccttatccgagtacagtgactcatttgccaccgacagtcccttacccaagta cagtcactcatccgtcatcgacagttctaatccaagtacattcactcattcgtcaccgacagttccttttccaagtacag tcactcatccgtcaccaactgctccttatttaa |
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Protein
| Protein ID | pfu_aug2.0_857.1_24473.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_857.1_24473.t1 MVASSLIFRSFLIILIGITEDERGVLFAKEINLQNEMMLCNVFLGGKEKVNVSRVFEMHQMEDLNGDGNVQFNEFFLGLH KRARNVSMEYYEELFDLLNLNSTGKEHYTLEEHKANFLKADEDGDRDGTINMAECVEYLTKRASNVSMKFDKEWFHLLNL NSTGKKEYTHNENLENFFDADDDPTCQHTADLNIELLDNCYLGYGNDETFDYAHAHCASMGFHLVFLETLQEEQWLMDMV DNQNFKDRFWIGAIQVHTGEWQWGNGVPIHHARMTDPFTNEIHAVIKNDIGQNIDPRDISNKDAYICELAGATPVPSNSP STLPPPSPPPPPSTGATPVPSNSPSTLPPPSPPPPPSTGPCLLVSDLTIPTLTNCYLTFLQVDDHNNAFEHCKFLGFHLV FLETFQEQIWLQNQLTGIAEWQWDNGVLIHNGRIQDPFSNHLHALLPKIEGIPLEPQYGIHEFPYICEFAGSTYDPSTIP TVSPTLPYPSTVTHPSPTVPYPSTVPYPSPSTIQNSSPTVPYQSTVTHPLTTVPYPSTVTHPSPTVSYPSTVTQPSPTVP YPSTVTHLSPIVPYPSTVTHPSPTVSYPSTVNHPSPTVPNPSTVNNPSPTVPYPSTVTHPSPTAPYPIHNPSTVNNPSPT VPYPSTVTHSSPTIPFPSTVTHPSSTVPNPSTVNNPSPTVPYASTVPNPSPTVPYPSTVTHSSSTVSYPTTVTHPSSTVP YPSTAAHPSSTVPYPSTVTNPSPSVPYPSTGTQPSSAVSYPSTVTNPSPTVPNPSTVTYPSPTVTYPNTIQNPSSTVTYP STVTHPSPTVPHLSTVTHPSPTVSYPSTVTQPSPTVPYPSTVTHLPPTVPYPSTVTHPSSTVLIQVHSLIRHRQFLFQVQ SLIRHQLLLI |
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