Gene
| Gene Model ID | pfu_aug2.0_858.1_27847 |
|---|---|
| Locus | scaffold858.1 : 7082 ... 10735 : - |
| To GenomeBrowser | scaffold858.1:7082..10735 |
| Genes list of scaffold | scaffold858.1 |
| Synonym | pfu_aug1.0_10880.1_39120 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_858.1_27847.t1 | 2 | 1 | MFS_1 | 46 | 213 | 1.8e-32 | 112.4 | 2.5e-25 | 1.2e-21 | 76.8 |
| pfu_aug2.0_858.1_27847.t1 | 3 | 1 | Sugar_tr | 67 | 249 | 4.1e-08 | 32.2 | 5.1e-11 | 2.5e-07 | 29.6 |
| pfu_aug2.0_858.1_27847.t1 | 2 | 2 | MFS_1 | 327 | 496 | 1.8e-32 | 112.4 | 1.2e-14 | 5.8e-11 | 41.7 |
| pfu_aug2.0_858.1_27847.t1 | 3 | 2 | Sugar_tr | 338 | 422 | 4.1e-08 | 32.2 | 1.8e-05 | 0.091 | 11.3 |
| pfu_aug2.0_858.1_27847.t1 | 3 | 3 | Sugar_tr | 460 | 499 | 4.1e-08 | 32.2 | 0.058 | 290.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_858.1_27847.t1 | gi|557012422|ref|XP_006006780.1| | PREDICTED: monocarboxylate transporter 14 isoform X1 [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_858.1_27847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27847.t1 atggatgacacagattgcgaagatgctgttgttaaaatacagaatggggaggttcaaagcgacgaaagtctcaatgatcg accagaaggaggatggggctggatcgtagttttcagtgcattcatatttaatgtcattacagatggatgtgcatattcgt ttggggtgctattcgctcaccttgtcgattacttcggcgcatcaagaagtaaaactgcatggatagggtccttattcaat tccgccccgttattgtgcggccccatagcgagtttcgttacgaatcggtacggattccgaaaagcatccataatcggagg agtgattacatttctgggattctttaccagtgtctttgcaccatctattgaaactctctgtattacatacggacttgttg cagggttcggagtatcgttaccgtatttggtttcgagtgtcgtagttgcgaactatttcagacggaagctcactcttgca tccggtctcgcagaatgtggcgccggcgtcgggactctaatttttgcacctcttctagaatacctcattagcacatatgg atggcgtggtgctatattgatactctcaggaattgtagcgaatacgatagtttgtgctgcagttttccgtcctttgtctt tgaaatctagatttcactctagtagtgaaattattattgaatcttctacaacgatgattggtaaagaaaataacgatgac gagaacgcaaaagatgaaagactgatgttgatgatctcagagttcgaagctgaatgtaatcattctccttctactacaag acagacattcgaatttacagaaaaagaaaatttagaaacaggtgaaaggacgtcaaaactctgcaaaggagtgaacaatg actgctcgttgctcaataaaatttcatgttgccactcaaattttattctcaatatcttaaacgcgaatgtctcaatcttg ctcaattggaaatatttcttgttcgctgtatcaaattttatgctgtacttttggtatgatgtgccgtacgtattcactgt ggatagggcggttgaactcggagaaagcgactatgatgcttcctttgtcgtatcagcaattggaatccttcatacaatcg gaaatatagtgtgtggattcattggagatagaaatggtgtcaacaaatcttgtttctactcagtctctctctggatttgc ggggttgccttagcgttagtccctctcttcaagcagcttgtaggtaccggtgttttggtaggaatttatggtcttttatc ggcagccaccgaggccctgaaaatggcgatcgttgtggatattgttggtatgaccaaactgacggatgcttatggacttc taatgtttcttcagggaatcgccaatctgacggggccacctgtggcaggttggctgtttgacatctcggggtcctatgac catacgttcctcacagcaggtatatctttagtcgttgccggcgtgctgtccatgataccagcatgtggtcgcaaggaagt ggaaaaatga |
|
Protein
| Protein ID | pfu_aug2.0_858.1_27847.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27847.t1 MDDTDCEDAVVKIQNGEVQSDESLNDRPEGGWGWIVVFSAFIFNVITDGCAYSFGVLFAHLVDYFGASRSKTAWIGSLFN SAPLLCGPIASFVTNRYGFRKASIIGGVITFLGFFTSVFAPSIETLCITYGLVAGFGVSLPYLVSSVVVANYFRRKLTLA SGLAECGAGVGTLIFAPLLEYLISTYGWRGAILILSGIVANTIVCAAVFRPLSLKSRFHSSSEIIIESSTTMIGKENNDD ENAKDERLMLMISEFEAECNHSPSTTRQTFEFTEKENLETGERTSKLCKGVNNDCSLLNKISCCHSNFILNILNANVSIL LNWKYFLFAVSNFMLYFWYDVPYVFTVDRAVELGESDYDASFVVSAIGILHTIGNIVCGFIGDRNGVNKSCFYSVSLWIC GVALALVPLFKQLVGTGVLVGIYGLLSAATEALKMAIVVDIVGMTKLTDAYGLLMFLQGIANLTGPPVAGWLFDISGSYD HTFLTAGISLVVAGVLSMIPACGRKEVEK |
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