Gene
| Gene Model ID | pfu_aug2.0_858.1_27848 |
|---|---|
| Locus | scaffold858.1 : 12553 ... 32435 : - |
| To GenomeBrowser | scaffold858.1:12553..32435 |
| Genes list of scaffold | scaffold858.1 |
| Synonym | pfu_aug1.0_36495.1_70190 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_858.1_27848.t1 | 3 | 1 | FNIP_N | 33 | 140 | 1.6e-16 | 60.9 | 4.4e-20 | 1.6e-16 | 60.9 |
| pfu_aug2.0_858.1_27848.t1 | 1 | 1 | FNIP_M | 278 | 506 | 0.0 | 282.3 | 0.0 | 0.0 | 281.6 |
| pfu_aug2.0_858.1_27848.t1 | 3 | 2 | FNIP_N | 706 | 742 | 1.6e-16 | 60.9 | 4.0 | 15000.0 | -4.5 |
| pfu_aug2.0_858.1_27848.t1 | 3 | 3 | FNIP_N | 796 | 858 | 1.6e-16 | 60.9 | 1.3 | 4700.0 | -2.1 |
| pfu_aug2.0_858.1_27848.t1 | 1 | 1 | FNIP_C | 889 | 1048 | 0.0 | 170.3 | 0.0 | 0.0 | 169.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_858.1_27848.t1 | gi|524881264|ref|XP_005097286.1| | PREDICTED: folliculin-interacting protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_858.1_27848.t1 | gi|557020620|ref|XP_006010628.1| | PREDICTED: folliculin-interacting protein 1 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_858.1_27848.t1 | gi|676488256|ref|XP_009064558.1| | hypothetical protein LOTGIDRAFT_236112 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_858.1_27848.t1 | gi|557020618|ref|XP_006010627.1| | PREDICTED: folliculin-interacting protein 1 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_858.1_27848.t1 | gi|260802692|ref|XP_002596226.1| | hypothetical protein BRAFLDRAFT_117992 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_858.1_27848.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27848.t1 atgtattactgtttgaacttcagaaatttgggatgtgcatctgaacctcatatagcaaggaatgatagcataccagcacc caagttggacccgtcacagattcgcctagtgatctaccatgacagtgaaagttgtcgacagctcatatttgattctaagg cagttaaaagggtggaggaacccaagcgtcgatgcatcagaaaggacaagtcgttggatagtaacaggtgttcgtttggt agtgatcctgggatatacagaccttgtcactacagaaatggtcccaaatatgagtttttgaagcccggctctgacgtcaa gatgttggaggagatcatgtttggatctgtaggaatggcgtacaagggagcctcagtcaaagtacatttcctcagagatg agatggtattgacaaaagtcttcattcctacgtgcaataatcagaagagagagtcccatggaagagacagtgaccttgag ctggattctttttcaccacccatccactctgacacagatttatcatgtccacgccttatctcaaacagcgaaagatctat aggatctattgctcaaagtgtgccagtagatgtaccttcacctaaaagtgccaaatttgacatttttgatagagacagcg gtttagcctcaatgacctctagtggtagtttccatcaccagtttccgtcccccagcagtagttgtagtagtataagcagt tacagcagtctacacagacgatggattaggggcgtgtctacatccatagagggatgtctccgtaagagaaactcccatga taacttagtgtcacaagatgtatcaggaaactccagttctggttcaccacgccctaaacacaccaaggttgccatgggga tcctgtttgggttgtgtgatgatgagaaagctacagagaacaaccagcttttccagaattttctgttctcacatatcaca ttgtttgagggacatttggagaaactaaggaacggggtggagaaggcatactacactagaaaaagatttgtgcacattgt catggagtcattggagaagtttcagcaagacgtagttgacttgtacacaacaccgcgtcttacagaaccagtgtggctca acatgatgtgctttaccagttatagatacaagttatgtgaagattttatgaaggaattcatgggattggtctcgaagctt gaaaacaaaaacactcatttttttatgagtacattaatcacagctgtcctcactcaccacctggcctgggtgccgacagt tactccagccggtggcactccgtccaaaacgtacctcacaaaccactctgccaaatgggtggacattctagccaaaatgc acccatacaatcctctctgggctcaactaggtgacttatacggtgctataggataccctattaaagttgcaaggacagtt atcgtagggaaaaaagtagatctagtcaaaaagctactgtacatacttacttactttattcgctgtagtgatgttcaaaa taaagatttgtcatctctcgaaaatttcatagatgaagtgagtctggactccccattggatgataaatctgttattacgc ccattgaagaagtagccaatcagagcttagagcaaaatgttatgcaaagctcaaactgtagcgataaaatgcagggaagt tgtgatacattaacagatgattacagtgttactggtgataatttaaggcacgaatctgtgatatcaacttacgagggtag ttatttaaaacagggagattctcaaacatccggcatttcacaaacaaattataacagtcaagagccttccactgtaaggc cgaactctttaccgttaagtaagcaagattcggaaaagtgccggaagagtattggaagtggaactgatcacaaggatgtg gcattattttgtgatagcataaattcggatgaaggctactgttcaatagtgcaatcctccaatgactatgataaggagaa atctcagttaccatgccgattgtcagattcagaggtcagggaagatgtgaaggtagtaaatgttcatcatgtgtcaaagg cagttctacttaaagagacgcattcaatggaggcattagacacctgtggttcaccacattcctccccgaataaaagaact aagtccatgcttacagagaaactctcaaacaaaagtgggcaggaatctcgtgtacccacttcagaaatccgtcaaaggtt cttaaaggaaggcagccatagcatatttaatgaatatttcgatgacgagagtatagaagcaaaaaccattgaccaggtag atgaggcagatagaatagtgaatcatcccttagtcgggggaagaaatagtgctcagagaatgatttcacattctgtggac aatattcctgatgcatctggcagcttgccaagtcaaccagaaacgcaagggcacgagaaaagattggggtcagtaggtca catggtacgtccaagaatgtcctccatatcacggcaaattagtactgaccggggcagaggttcaacagcacctggaaggt gtcggtcagtgacacccacagagttaagtaggcgtcgtcatctctcttccaccagcagcttggactttgatcatatggat ccattggttcattttaaggaactggaaatgccaaacatcgtagacgagacttcaggcagcagcatcaagatgtttgatcg taattttggccgttcattgttggcgggtttctcttctcactatctgtcagatttcgttctccacggaacgtcagaagctg acttcaaggaaaaaatgcacctggatttacacatggctacacagcattcagtgctggacgagccaatatcggaagctgtg tgtattattgctgacacagacaagtggagcgtagaaatcgctagaacgggcactggtgcgcaacctgtcgtagcgtcaca actagtctgtaatatgctggaaggagtccaacaactctggaagctgaaaatgagctctgaattttgtttgatgcatttag aagaccgtcttcaggagatttatttcaagagtaaaatgttggcagagtaccttaaagacgtgaagagaaatgacgtcaac atgaaagagctcaagaatttattagagtaa |
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Protein
| Protein ID | pfu_aug2.0_858.1_27848.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27848.t1 MYYCLNFRNLGCASEPHIARNDSIPAPKLDPSQIRLVIYHDSESCRQLIFDSKAVKRVEEPKRRCIRKDKSLDSNRCSFG SDPGIYRPCHYRNGPKYEFLKPGSDVKMLEEIMFGSVGMAYKGASVKVHFLRDEMVLTKVFIPTCNNQKRESHGRDSDLE LDSFSPPIHSDTDLSCPRLISNSERSIGSIAQSVPVDVPSPKSAKFDIFDRDSGLASMTSSGSFHHQFPSPSSSCSSISS YSSLHRRWIRGVSTSIEGCLRKRNSHDNLVSQDVSGNSSSGSPRPKHTKVAMGILFGLCDDEKATENNQLFQNFLFSHIT LFEGHLEKLRNGVEKAYYTRKRFVHIVMESLEKFQQDVVDLYTTPRLTEPVWLNMMCFTSYRYKLCEDFMKEFMGLVSKL ENKNTHFFMSTLITAVLTHHLAWVPTVTPAGGTPSKTYLTNHSAKWVDILAKMHPYNPLWAQLGDLYGAIGYPIKVARTV IVGKKVDLVKKLLYILTYFIRCSDVQNKDLSSLENFIDEVSLDSPLDDKSVITPIEEVANQSLEQNVMQSSNCSDKMQGS CDTLTDDYSVTGDNLRHESVISTYEGSYLKQGDSQTSGISQTNYNSQEPSTVRPNSLPLSKQDSEKCRKSIGSGTDHKDV ALFCDSINSDEGYCSIVQSSNDYDKEKSQLPCRLSDSEVREDVKVVNVHHVSKAVLLKETHSMEALDTCGSPHSSPNKRT KSMLTEKLSNKSGQESRVPTSEIRQRFLKEGSHSIFNEYFDDESIEAKTIDQVDEADRIVNHPLVGGRNSAQRMISHSVD NIPDASGSLPSQPETQGHEKRLGSVGHMVRPRMSSISRQISTDRGRGSTAPGRCRSVTPTELSRRRHLSSTSSLDFDHMD PLVHFKELEMPNIVDETSGSSIKMFDRNFGRSLLAGFSSHYLSDFVLHGTSEADFKEKMHLDLHMATQHSVLDEPISEAV CIIADTDKWSVEIARTGTGAQPVVASQLVCNMLEGVQQLWKLKMSSEFCLMHLEDRLQEIYFKSKMLAEYLKDVKRNDVN MKELKNLLE |
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