Gene
| Gene Model ID | pfu_aug2.0_858.1_27849 |
|---|---|
| Locus | scaffold858.1 : 37126 ... 75430 : + |
| To GenomeBrowser | scaffold858.1:37126..75430 |
| Genes list of scaffold | scaffold858.1 |
| Synonym | pfu_aug1.0_610.1_15158 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_858.1_27849.t1 | 2 | 1 | 7tm_7 | 59 | 69 | 4.1e-13 | 49.1 | 3.7 | 3900.0 | -3.5 |
| pfu_aug2.0_858.1_27849.t1 | 1 | 1 | AAA | 437 | 567 | 1.3e-37 | 128.9 | 2.4e-40 | 2.5e-37 | 128.0 |
| pfu_aug2.0_858.1_27849.t1 | 2 | 2 | 7tm_7 | 657 | 720 | 4.1e-13 | 49.1 | 5.4e-16 | 5.8e-13 | 48.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_858.1_27849.t1 | gi|390361005|ref|XP_783737.3| | 0.0 | |
| pfu_aug2.0_858.1_27849.t1 | gi|332000025|ref|NP_001193643.1| | fidgetin-like protein 1 [Bos taurus] | 0.0 |
| pfu_aug2.0_858.1_27849.t1 | gi|555996583|ref|XP_005910026.1| | PREDICTED: fidgetin-like protein 1 [Bos mutus] | 0.0 |
| pfu_aug2.0_858.1_27849.t1 | gi|594100959|ref|XP_006073571.1| | PREDICTED: fidgetin-like protein 1 isoform X1 [Bubalus bubalis] | 0.0 |
| pfu_aug2.0_858.1_27849.t1 | gi|742232966|ref|XP_010829342.1| | PREDICTED: fidgetin-like protein 1 [Bison bison bison] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_858.1_27849.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27849.t1 atggattttgaagaagaagatcaacaatatttgcatcatcatcaaaaattgcttttccatgaaaagttagagaatggaac tcctgcagagagagcagaaattaccagaaacattctggcacatttacacatagccttcaggaatggaaagttagtaagaa tactattctaccggtacttcatagttttgattatcactggactcaataattatgccgatggagctttggccttatgcagc ttgtatagaaatgaaagtcagaaatggaaatcttcacttacttctgaacaatgtaagaagaaagattggtttcaaaagat cttaaagagaagccaggaatcctcaaatcgtcttcttcctcaagacaaacagaataccgtcctgataagatcagaaaatg actctaacatggcaaacggccattctttgccgaaacaaaatgtcacagagacaattacacctagagacccatcaagtatc agtagaattcaaagtatgatgaggaatgacagacctgttcaacctcacattgccaacaatatggaggaatttagaagtta cccagaagtcaaagctccagaaaacttcccatcattccctagtcatggtggtggacctagagaagatttcaaaaggaagc cattgtttgccaacagtggtcccagtaacaacatggaaagcaatgctaataatttcggctacaacaacagcagtaatgga ccacaacatggacagcaaggtctatacaggaaaagtgaggtaggtggaatgaagcgtcctttccgagaaatagatcctgg tcaggtagatgatcaaagagatgtcctgtcaaataatccaggtccgtttaggactgctagagaacaacttagtattgata atcaaaagaagcacaacaaaggaagaggtcaggtgtccacaatgtcgtatggaactgctaagaaatctctggggactcgg cgaggtcccagcagtaagtttgtacctcctgtgatgaacaaagatgaagatgacggcaatcctggtgtgtgtatgaatgc agtaagcaagtctatatttaataagggtggatccagttctggaggcagtgggtctggtgggggggatgaaccagtggacg aacgattaaaaggaattgaaccaaaaatgatagaactcatcatgaatgagattatggaccatggacctcagatgtcttgg gacgatatagcaggacttgagtttgcaaagaagacaataaaagagattgtggtgtggcccatgcttaggccggacatttt cacaggtcttaggggtccccctaaaggacttctgttatttggaccacctggcacaggcaaaactttaataggaaaatgca ttgccagccagtctaaatcaacattctttagtataagtgcctcttctttaacttcaaagtgggtaggtgaagcagagaag atggtacgagccatgtttgccgttgcgagatgttaccagcctgctgtagtgtttatagatgagatagactcactgctgtc tcaaagaacggacggtgaacatgaagcatctcggagaattaagacagaattccttgttcaactggatggtgcggccacag tatcagatgacagaatactagtaataggagcaactaacagaccccaggagatagatgaagctgccaggaggagatttgtt aagaggttatacattcctctcccagagggttctgcccgcagacagatcgtagtcaacctgttatctcaacagaagtacca gcttacagaagcacagcttagcgccatagagcaaagatctgatggatactctggtgcagatgtagctaatctatgtagag aggcagctttaggtccaatacgctccatggcctttggtgaaatagagaacatctctgctgatcaggttcgtcctatattg tttgaggactttgacgcagccttcatgcaagcacatggtccacttggaacaatatacactatagatctgcgagccatggc catagaacagagtcaacagctttcagttttccttacccagctgaccagcgctcctatcggctttactgcttttggattgt tcacgatcgataaaccaactataataacatttgccggaagtattgtgacgtatgcagtagtggtcattcagttcaagccg tcctcggacagcaccagtgtccttcaacaagtagtggctaatatcacaacgtaa |
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Protein
| Protein ID | pfu_aug2.0_858.1_27849.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27849.t1 MDFEEEDQQYLHHHQKLLFHEKLENGTPAERAEITRNILAHLHIAFRNGKLVRILFYRYFIVLIITGLNNYADGALALCS LYRNESQKWKSSLTSEQCKKKDWFQKILKRSQESSNRLLPQDKQNTVLIRSENDSNMANGHSLPKQNVTETITPRDPSSI SRIQSMMRNDRPVQPHIANNMEEFRSYPEVKAPENFPSFPSHGGGPREDFKRKPLFANSGPSNNMESNANNFGYNNSSNG PQHGQQGLYRKSEVGGMKRPFREIDPGQVDDQRDVLSNNPGPFRTAREQLSIDNQKKHNKGRGQVSTMSYGTAKKSLGTR RGPSSKFVPPVMNKDEDDGNPGVCMNAVSKSIFNKGGSSSGGSGSGGGDEPVDERLKGIEPKMIELIMNEIMDHGPQMSW DDIAGLEFAKKTIKEIVVWPMLRPDIFTGLRGPPKGLLLFGPPGTGKTLIGKCIASQSKSTFFSISASSLTSKWVGEAEK MVRAMFAVARCYQPAVVFIDEIDSLLSQRTDGEHEASRRIKTEFLVQLDGAATVSDDRILVIGATNRPQEIDEAARRRFV KRLYIPLPEGSARRQIVVNLLSQQKYQLTEAQLSAIEQRSDGYSGADVANLCREAALGPIRSMAFGEIENISADQVRPIL FEDFDAAFMQAHGPLGTIYTIDLRAMAIEQSQQLSVFLTQLTSAPIGFTAFGLFTIDKPTIITFAGSIVTYAVVVIQFKP SSDSTSVLQQVVANITT |
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