Gene
| Gene Model ID | pfu_aug2.0_858.1_27855 |
|---|---|
| Locus | scaffold858.1 : 139567 ... 205348 : + |
| To GenomeBrowser | scaffold858.1:139567..205348 |
| Genes list of scaffold | scaffold858.1 |
| Synonym | pfu_aug1.0_4664.1_52333 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_858.1_27855.t1 | 6 | 1 | Ank_4 | 33 | 69 | 3.2e-29 | 100.7 | 5.0e-06 | 0.0057 | 17.1 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 1 | Ank_2 | 38 | 104 | 4.6e-30 | 103.7 | 1.1e-12 | 1.3e-09 | 38.2 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 1 | Ank_5 | 40 | 89 | 1.6e-27 | 94.8 | 8.4e-10 | 9.6e-07 | 28.8 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 1 | Ank | 48 | 80 | 2.2e-32 | 109.2 | 6.7e-10 | 7.6e-07 | 28.6 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 1 | Ank_3 | 48 | 75 | 5.1e-24 | 81.9 | 3.5e-05 | 0.04 | 14.1 |
| pfu_aug2.0_858.1_27855.t1 | 6 | 2 | Ank_4 | 49 | 101 | 3.2e-29 | 100.7 | 6.0e-11 | 6.9e-08 | 32.8 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 2 | Ank_5 | 68 | 122 | 1.6e-27 | 94.8 | 1.3e-10 | 1.4e-07 | 31.4 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 2 | Ank | 82 | 111 | 2.2e-32 | 109.2 | 0.0073 | 8.3 | 6.4 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 2 | Ank_3 | 82 | 102 | 5.1e-24 | 81.9 | 0.24 | 280.0 | 2.2 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 2 | Ank_2 | 85 | 137 | 4.6e-30 | 103.7 | 9.7e-09 | 1.1e-05 | 25.6 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 3 | Ank_5 | 102 | 137 | 1.6e-27 | 94.8 | 1.6e-05 | 0.018 | 15.2 |
| pfu_aug2.0_858.1_27855.t1 | 6 | 3 | Ank_4 | 115 | 135 | 3.2e-29 | 100.7 | 0.00064 | 0.73 | 10.4 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 3 | Ank | 116 | 137 | 2.2e-32 | 109.2 | 7.8e-05 | 0.089 | 12.6 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 3 | Ank_3 | 116 | 137 | 5.1e-24 | 81.9 | 3.1e-05 | 0.036 | 14.3 |
| pfu_aug2.0_858.1_27855.t1 | 6 | 4 | Ank_4 | 117 | 176 | 3.2e-29 | 100.7 | 3.2e-10 | 3.6e-07 | 30.5 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 4 | Ank_5 | 151 | 186 | 1.6e-27 | 94.8 | 3.2e-09 | 3.6e-06 | 27.0 |
| pfu_aug2.0_858.1_27855.t1 | 6 | 5 | Ank_4 | 157 | 208 | 3.2e-29 | 100.7 | 2.5e-11 | 2.9e-08 | 34.0 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 4 | Ank | 158 | 186 | 2.2e-32 | 109.2 | 2.5e-11 | 2.8e-08 | 33.1 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 4 | Ank_3 | 158 | 183 | 5.1e-24 | 81.9 | 4.5e-09 | 5.2e-06 | 26.1 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 3 | Ank_2 | 160 | 229 | 4.6e-30 | 103.7 | 5.5e-17 | 6.3e-14 | 52.0 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 5 | Ank_5 | 185 | 227 | 1.6e-27 | 94.8 | 2.0e-08 | 2.3e-05 | 24.4 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 5 | Ank | 190 | 218 | 2.2e-32 | 109.2 | 4.2e-10 | 4.7e-07 | 29.2 |
| pfu_aug2.0_858.1_27855.t1 | 6 | 6 | Ank_4 | 190 | 229 | 3.2e-29 | 100.7 | 1.1e-08 | 1.3e-05 | 25.5 |
| pfu_aug2.0_858.1_27855.t1 | 5 | 5 | Ank_3 | 190 | 216 | 5.1e-24 | 81.9 | 2.8e-07 | 0.00032 | 20.6 |
| pfu_aug2.0_858.1_27855.t1 | 2 | 1 | SH3_2 | 253 | 307 | 1.3e-07 | 30.9 | 3.3e-10 | 3.7e-07 | 29.5 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 1 | SAM_1 | 460 | 517 | 9.79508e-43 | 144.1 | 6.3e-16 | 7.2e-13 | 48.5 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 1 | SAM_2 | 462 | 515 | 2.5e-32 | 110.5 | 8.0e-12 | 9.2e-09 | 35.0 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 1 | NCD1 | 473 | 484 | 8.7e-06 | 25.3 | 1.6 | 1900.0 | -1.4 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 2 | SAM_1 | 527 | 574 | 9.79508e-43 | 144.1 | 8.4e-12 | 9.6e-09 | 35.3 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 2 | SAM_2 | 528 | 573 | 2.5e-32 | 110.5 | 2.5e-09 | 2.8e-06 | 27.0 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 2 | NCD1 | 534 | 577 | 8.7e-06 | 25.3 | 0.00012 | 0.14 | 11.9 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 3 | SAM_1 | 583 | 642 | 9.79508e-43 | 144.1 | 5.9e-20 | 6.8e-17 | 61.4 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 3 | SAM_2 | 583 | 642 | 2.5e-32 | 110.5 | 1.2e-15 | 1.3e-12 | 47.3 |
| pfu_aug2.0_858.1_27855.t1 | 3 | 3 | NCD1 | 587 | 649 | 8.7e-06 | 25.3 | 6.0e-05 | 0.069 | 12.9 |
| pfu_aug2.0_858.1_27855.t1 | 2 | 2 | SH3_2 | 1253 | 1275 | 1.3e-07 | 30.9 | 4.6 | 5200.0 | -3.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_858.1_27855.t1 | gi|507536024|ref|XP_004652047.1| | PREDICTED: caskin-1 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_858.1_27855.t1 | gi|755804411|ref|XP_011289009.1| | PREDICTED: LOW QUALITY PROTEIN: caskin-1 [Felis catus] | 0.0 |
| pfu_aug2.0_858.1_27855.t1 | gi|478528326|ref|XP_004438340.1| | PREDICTED: caskin-1 [Ceratotherium simum simum] | 0.0 |
| pfu_aug2.0_858.1_27855.t1 | gi|472367376|ref|XP_004403221.1| | PREDICTED: caskin-1 [Odobenus rosmarus divergens] | 0.0 |
| pfu_aug2.0_858.1_27855.t1 | gi|635030135|ref|XP_007980578.1| | PREDICTED: caskin-1 isoform X2 [Chlorocebus sabaeus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_858.1_27855.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27855.t1 atggttaaagaacacgatattttacagtctgtgaaagacagagatccaactcttctacataaacttctacacagagcaag caaagccaataaaaaacttctgggaggctcaaagagacttaacatcaactttcaagacgaagatggaatgtctgcattac atcaggcctccctaatgagcgacttagaaatgatgcagatgcttttagaaaatggcgccaatccttctctcaaagacaat aaaggtatgcttgccattcactatgctgcatggcaggggaagtctgagccggtaaatctcattctgcttcacaatggagt tccaacggtggtgaactttgagaacaagactcccttggacttggcatgcgagtttgggagatacagggtggttgatctcc tgttgaggagtaatctatgtgcaccattattgatggacagtccgactgatttatttgatgacaaacggacaacttgtctc catctagcagctaaaaatggccacatagaaatcatcagattattactacaagctggtgtgaacatcaatcgttgcactct tcgaggaacctgtctccatgaagccgccctatgtggtaaaacagaggtggcacgacttttacttgactgtggcgtagacg tgaacaagactaactcgtatgaccaaacagcccttgacattgttacaacatacacaacatcccgtgccggaaaggatctc aaactactccttaaagaagccagttttgctgtccaagcaagggcagtcaaagactattgtaacatttatgacccgcaaac cctcgccttcaaacaaggggacataattaaggtaatagagcaaagagaggatgcatggaagggcgtggtagtaagtgatg gtaggatggccaagccgggcttcttccctcccgatcacgtggtgctaatagataactcaacaaatctgccaaaccatgtg atacagggtaaacgagtgcctatgcctaatgtgcctgacttattgaaccgtagtcctggttaccctcccccacaccccgg gggtatggaccacgccttccctcccccgccatctgtattctctccgaagtcaccgatcagagacggatttggagtagacc atagcgtgttcgcctatccaccctcaccttaccatacccttcattcttcgtttgagcactcgcacagctaccccaacgtt cagatcaacaataatcaccggctgtcgggacagagctgcgagtcgggtgtgtcctcccgccagagttatcatagtaattc cagctctagtctaggcagtctggatcgactggaggaaaccggacatatcagccagatcaatgtggctgagctgttcaggg ccggtatgccggatcatgaggtgctgcgagcctggctccgtgacctgcattttgaggaatactacgaatgcttcatgaaa gccggttatgatatgcccaccatatctcacatgactccacaggatttatctgccattgggatcaccaagcctgggcatag gaagagacttaaagcagagatcgtcaggcttaacatacatgacggcataccagactataaaccgaatgacgtaatggagt ggttacacagactgggattagagcagtattaccagactctgttacagcaggggtatgataacatagactacgtcacggac atcatgtgggaagatctggaggaaatcggcatttctaaattagtcgggacaaatgccgtttacttgaatgacgtaatgga gtggttacacagactgggattagagcagtattaccagactctgttacagcaggggtatgataacatagactacgtcacgg acatcatgtgggaagatctggaggaaatcggcatttctaaattaggtcaccagaagaagataatgcttgcaatcgacaga ttaaaaagaataacgactaactataaacgtgcctctaccatggaagctaggaggggatcaagtgaaatcttggatccacc atcaacgttcaacactagatggtcaggagaagactacacacaggatctgcctcagtcgccttttaagaatcgtaaatctt catcgggtgataatataaacatgaataatattggcacaccgccagatcaccgattttcacatcatagtgatagactaagt caccatagtgacgggagttcagagttcatgccctctagtccaatcgttggcggttaccaaccagatgtagtagctataca agtcaaacgacattcgtctcagtctggctcacctaaagacatggcgggtcaacctataacgtaccaatcttttcaagtcc cggcatcaccaaaggataaggaaagtagagacagcactccaactgcggaggataatgaaatgtcaggttcaccagtgact gtggcaccaatggtgcctaaagcagtgattaaacccaaacctgtcgctaagataatagcaaagactaaacggagcagtcg tgagtgctctcctgatattattgatgtggaaaaacacgaggtcgagaaaaatcaggatatgaacatgagtccgaaaacca atcagactttctttccgtcgggtgtgaaagtgaccatgagtcagtcagatcatatttatgataaacctcgattaccagct tcccccaagtctcacagtcattatcaagtgccaaatgtttctatgtcacagtcattgccaaacggtcaaaccagtgcact atatgtctcaactcaacaagatctgacggttccgtcacagagttcgccaaaaagtcgaaaagtgcctcctcctccacctc ctaaacgaacaaattcaatttcaaatcgtcaggatgcaaactttgctgggagcatccccaaatctgccattcagtctacc tatgctcatgttcagaggacgtcctcacaatctcaaaacggtaacgacgtgctctcttctcaaccggcacctaagtcagc gaacaataactccccaaaacaaactgctcctgtcgttaatcaggtctcacagaacatttctcctaaccaacaagcctttg cttcttgtgttcagagtttatcagaaaaatttggaagcaaacggaaggagttaacaaatgacgagaacctgagttctgat ggggaggacttccctcctcctcccccgcccattgccatggacatcattacgccaaaaattcataattacggaataccgtc taaaaatgacaaagtgggaagtgactacagaataaaacccaaagtggaatcaccaagtcataataataaagttcataata atatttataataataattcttcaaacagtgcagcttttgacgttaaattgaaaagaacggcagtcgctaatatttctcat aatacagtgtctcattcttcatctccaattttaccggcgaaatctcatgcaacagcacaatattcgccctcgaggcaaga accgtcaaaggtaactaagtcaacggaatcggaaaaaccattgccgagtgttaaacccacagtggagaatttagaattga agagaaaggactcaacctcaagtcatgattctactgtgtcaacatcaagtattgattccaatactttaccttttgctaat gagaatgtaggaacgattaaacagcgtacgcctacaactaaaccctcgatagtgccaataaatgagaatgcggaaccaaa agactccattctcccaatgacaaacagtgctcatacctttagaccctctgttccacagaaaccttcatcaactcacaaag atttaaaacctgttgtgccagagaaaccaaaaggacctttaaagaacaagcaaggtgatgtgttaacagatatagactgt atgctacaaggacttacggaggaattggatgctatgttagaagaggaaatggaactcagtacaccagcggaatcctga |
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Protein
| Protein ID | pfu_aug2.0_858.1_27855.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_858.1_27855.t1 MVKEHDILQSVKDRDPTLLHKLLHRASKANKKLLGGSKRLNINFQDEDGMSALHQASLMSDLEMMQMLLENGANPSLKDN KGMLAIHYAAWQGKSEPVNLILLHNGVPTVVNFENKTPLDLACEFGRYRVVDLLLRSNLCAPLLMDSPTDLFDDKRTTCL HLAAKNGHIEIIRLLLQAGVNINRCTLRGTCLHEAALCGKTEVARLLLDCGVDVNKTNSYDQTALDIVTTYTTSRAGKDL KLLLKEASFAVQARAVKDYCNIYDPQTLAFKQGDIIKVIEQREDAWKGVVVSDGRMAKPGFFPPDHVVLIDNSTNLPNHV IQGKRVPMPNVPDLLNRSPGYPPPHPGGMDHAFPPPPSVFSPKSPIRDGFGVDHSVFAYPPSPYHTLHSSFEHSHSYPNV QINNNHRLSGQSCESGVSSRQSYHSNSSSSLGSLDRLEETGHISQINVAELFRAGMPDHEVLRAWLRDLHFEEYYECFMK AGYDMPTISHMTPQDLSAIGITKPGHRKRLKAEIVRLNIHDGIPDYKPNDVMEWLHRLGLEQYYQTLLQQGYDNIDYVTD IMWEDLEEIGISKLVGTNAVYLNDVMEWLHRLGLEQYYQTLLQQGYDNIDYVTDIMWEDLEEIGISKLGHQKKIMLAIDR LKRITTNYKRASTMEARRGSSEILDPPSTFNTRWSGEDYTQDLPQSPFKNRKSSSGDNINMNNIGTPPDHRFSHHSDRLS HHSDGSSEFMPSSPIVGGYQPDVVAIQVKRHSSQSGSPKDMAGQPITYQSFQVPASPKDKESRDSTPTAEDNEMSGSPVT VAPMVPKAVIKPKPVAKIIAKTKRSSRECSPDIIDVEKHEVEKNQDMNMSPKTNQTFFPSGVKVTMSQSDHIYDKPRLPA SPKSHSHYQVPNVSMSQSLPNGQTSALYVSTQQDLTVPSQSSPKSRKVPPPPPPKRTNSISNRQDANFAGSIPKSAIQST YAHVQRTSSQSQNGNDVLSSQPAPKSANNNSPKQTAPVVNQVSQNISPNQQAFASCVQSLSEKFGSKRKELTNDENLSSD GEDFPPPPPPIAMDIITPKIHNYGIPSKNDKVGSDYRIKPKVESPSHNNKVHNNIYNNNSSNSAAFDVKLKRTAVANISH NTVSHSSSPILPAKSHATAQYSPSRQEPSKVTKSTESEKPLPSVKPTVENLELKRKDSTSSHDSTVSTSSIDSNTLPFAN ENVGTIKQRTPTTKPSIVPINENAEPKDSILPMTNSAHTFRPSVPQKPSSTHKDLKPVVPEKPKGPLKNKQGDVLTDIDC MLQGLTEELDAMLEEEMELSTPAES |
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