Gene
| Gene Model ID | pfu_aug2.0_86.1_20185 |
|---|---|
| Locus | scaffold86.1 : 37714 ... 64015 : - |
| To GenomeBrowser | scaffold86.1:37714..64015 |
| Genes list of scaffold | scaffold86.1 |
| Synonym | pfu_aug1.0_16083.1_18305 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cd109 partial | GO:0048519 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_86.1_20185.t1 | 5 | 1 | A2M_N | 36 | 95 | 9.7e-19 | 67.4 | 0.15 | 220.0 | 2.1 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 1 | A2M_N_2 | 64 | 161 | 1.8e-39 | 134.6 | 0.0014 | 2.1 | 8.1 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 1 | A2M | 77 | 94 | 2.8e-20 | 71.6 | 7.0 | 10000.0 | -3.9 |
| pfu_aug2.0_86.1_20185.t1 | 2 | 1 | A2M_recep | 109 | 163 | 2.0e-23 | 82.3 | 0.097 | 140.0 | 2.6 |
| pfu_aug2.0_86.1_20185.t1 | 5 | 2 | A2M_N | 117 | 207 | 9.7e-19 | 67.4 | 5.0e-20 | 7.4e-17 | 61.4 |
| pfu_aug2.0_86.1_20185.t1 | 5 | 3 | A2M_N | 334 | 380 | 9.7e-19 | 67.4 | 5.8 | 8700.0 | -3.0 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 2 | A2M | 363 | 386 | 2.8e-20 | 71.6 | 0.53 | 780.0 | -0.3 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 2 | A2M_N_2 | 409 | 543 | 1.8e-39 | 134.6 | 6.40001e-41 | 9.4e-38 | 129.0 |
| pfu_aug2.0_86.1_20185.t1 | 5 | 4 | A2M_N | 443 | 469 | 9.7e-19 | 67.4 | 9.4 | 14000.0 | -3.7 |
| pfu_aug2.0_86.1_20185.t1 | 5 | 5 | A2M_N | 504 | 525 | 9.7e-19 | 67.4 | 0.65 | 970.0 | 0.1 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 3 | A2M | 789 | 802 | 2.8e-20 | 71.6 | 3.5 | 5100.0 | -2.9 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 4 | A2M | 878 | 944 | 2.8e-20 | 71.6 | 4.1e-23 | 6.1e-20 | 70.5 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 3 | A2M_N_2 | 970 | 1001 | 1.8e-39 | 134.6 | 2.1 | 3100.0 | -2.2 |
| pfu_aug2.0_86.1_20185.t1 | 1 | 1 | Thiol-ester_cl | 1080 | 1110 | 8.0e-16 | 56.9 | 1.3e-18 | 2.0e-15 | 55.6 |
| pfu_aug2.0_86.1_20185.t1 | 3 | 1 | Prenyltrans_2 | 1125 | 1197 | 9.2e-10 | 38.9 | 2.7e-06 | 0.0041 | 17.5 |
| pfu_aug2.0_86.1_20185.t1 | 2 | 1 | A2M_comp | 1129 | 1232 | 0.0 | 201.2 | 4.3e-38 | 6.4e-35 | 120.5 |
| pfu_aug2.0_86.1_20185.t1 | 3 | 2 | Prenyltrans_2 | 1137 | 1205 | 9.2e-10 | 38.9 | 4.0e-06 | 0.0059 | 16.9 |
| pfu_aug2.0_86.1_20185.t1 | 3 | 3 | Prenyltrans_2 | 1184 | 1304 | 9.2e-10 | 38.9 | 2.3e-07 | 0.00034 | 21.0 |
| pfu_aug2.0_86.1_20185.t1 | 2 | 2 | A2M_comp | 1236 | 1320 | 0.0 | 201.2 | 1.8e-25 | 2.7e-22 | 79.2 |
| pfu_aug2.0_86.1_20185.t1 | 4 | 4 | A2M_N_2 | 1362 | 1400 | 1.8e-39 | 134.6 | 1.8 | 2700.0 | -2.0 |
| pfu_aug2.0_86.1_20185.t1 | 2 | 2 | A2M_recep | 1425 | 1509 | 2.0e-23 | 82.3 | 8.7e-25 | 1.3e-21 | 76.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_86.1_20185.t1 | gi|513178334|ref|XP_419879.4| | PREDICTED: CD109 antigen isoform X3 [Gallus gallus] | 0.0 |
| pfu_aug2.0_86.1_20185.t1 | gi|697523832|ref|XP_009687457.1| | PREDICTED: CD109 antigen [Struthio camelus australis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_86.1_20185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20185.t1 atgatagtaccattattgctagcggtactcgctagctgttctttagcaaaagattcctacgtagtaatagttccgaacga tgtaagaccgggagtgcaattaaatgtcagcgtgaacattctcaaggccactgggcctgttgatgtcaaggccgatctac tccataaaactacacagaacaaagttgccaccaatacaaagacgtttaaccaaggctcaccaggagtgttgaccgttcag gttcctgacactttagccagcggaacatacgagttacttgttctgggaacaaatggtctacacttcacgaaccagactga ccttaaataccagtcaaagagcatgtccgtgttcatccaaacagacaaggctacctacaagcctggacagacagtcaatt tcagagcttttgccatacatccagacatgtccatatacactggtccaatcgacatcgatgtttatgatcccaacaccaat aagataaaacaatacaaaggactgcaggatgcgtcaggtgtggtcactaacttccttgaaatggacacaaagcccgttct aggagactggaaaatcaaagttaccgctcagggcagagcatccgaaaaggtgtttaccgttgcacattatgtattaccaa aatttgaggtgacggtaaatttgccgtcctatggtctgacgtcagacaacactctgtcaggatccgttaaggctacatac acttacggaaagcctgttcaagggaaagttcacgtacgtgtgaggatggagcgctggtaccgtccatataattataaagg tgcagaaccaatgatagaacagtcgttatcgattgatggtgatgtcaaattttccttaccactggacgttattaagaatg ccaatcgctacatgaacggcagagatttgatcgtagaggccaacgtaaaaatttcccaacaagatgatacaccaattaca ggtgcaaagacccaactctccatggcaaccagtgtgacatatgagcttcccgaaccttcaaccacgcctctttattattt tggccctagaaccaaaaactacaaccttcctgcacaaacgttcacagttcctgacacaggagttgttcccgttcaaatta cgattccagataatgctacaaacattaatctccatgcaacatatggaaagatttcggcttacaggaatttacaaaagagc tattcaccaagcaacagctacgtccagcttttcgtcaagtcatctagactaagggccggtactgcagcaagtttcgacgt caaatctacacagccagtctccgaattaacatatcagattttgtccagaggatcaatcgttaaagctggcaaggtcgatg gttcaaactcgaaaacgtttagttttaccatccccgtcaacgctaaaatggcgccaaacgccagaattgtcatatactac gtacgcactgacggtgaaatcgttactgatagtattagctttgatgttgatggagtgttccaaaaccaggtatctatagg tttcgacaaagccaaagcccaaccaggcgacaatgtcaatgtacaagtaacagctgatccacattcccttgtcagtcttc tggcggtagatcaaagtgttctacttctgaaatcagggaatgatatcacaccagaggaagtaattagtgagttgaaatcg tatgacacaatccaggatcaatcatcattctatggcggtggtggtattatgccatttggacgtaagaagagaatgatatt ctggccgtaccctgtttactatggaggttcagacgctcaacaaatattccaaaatgttggtgttaaggtgatgacagatg cagtcgtttatcatcataaggtccgccatccttactatcctttacctgtcgctggaggagggtttggagcaggaggtgga gggggaatgttccttaacggagcgatggccggaggtgctgtaccaaacagtgctttttctggcagtgtagcgggtggtcc agcaccacttcagacagtgcaaaggatccatttgctgccgccggaggaggttttggaggaggaggcggaggagaaatatt cccggcgatggcaggaggtgctgtaccaaatagtgcttttggtggcggagcgggtggtccagcaccacttcagacagttc aaagggtcaggaatgtctttcctgagacatggctttggactaattcaacaatgggattaccaacacctggcttttggggc gggagcggaaaaggtagacgcagcaatggtaccaccgatggctcctaacatggtaccaatgccagcaaaaccaccgtcaa actcacttaagtcggtggacaggattaggaacgtcttccctgaaacctggctctggactaacaaaacagtcggaattaat agcggaaatctctcattttatcgtctgaagaatcatgacaattatttcccctcttcttcagattatccagagttcgcttt tggaggaccaatggttgatatggcaaagggaaatgcaatggctgggatggctcctgtaccaggaatggttcctaacccgg ttccaatgccagtcaaaccaccatcaaactcattgaaatctgtagacagaattcgcaacgtcttccctgaaacctggctc tggacaaacacaacagtcggatctaatggtcaagtgtccatttcgaccactgtaccggacactattacatcatggatagc cagtgcgtttgctgtcaacaagaactctggtcttggaatcgccgattctactgccaagatagaagctttccgaccattct ttgtcagtctgaatctcccgtactctgtggttctggtgacacttgagaagaacgatgacttcagaagcattgtaatgcag ggtggtcaagaaaccttcgtgtccagtgtgcagacaaaaactgtcaaggtagctgctggcaaagccaagtctgtattctt ccccattgtaccagcagctctaggtaacattgacattaccgtgaaggctcagtcatccatggccgctgatggcgtcagaa gacagcttcttgttgagccagagggtgtgccaaaggagtacaatgttccaatactgatagatctgaaacagacctccacc ttcactaccacagtaccactaacgttaccgcctggagtagtggcgggatctgagntggcgggacctgagagggtcgggat tactgccataggtgacttaatgggaccaacagtgaatggactggataaactccttaaaatgccttatggatgtggagagc agacgatgttaggctttgcccctgatgtcttcgtcaccaactatctgacagctactcaccaactctcacctgatattgag gataaagctgtaggattcatggaaaagggataccagagggagttgacattccagcacaaagatggatctttcagtgcgtt tggggataatgacaaatcaggaagcatgtggttgactgctttcgttgcaaaatcattccatcaagccaaacagcatatat tcattgatgatgagacactaacacgagccattgactggatgattgctagacagagcaaagatggttccttccccgagcct ggccgtgttatccacaaagacatgcagggtggttcagcatcaggaccaggtcttacagcgtttgtattgatctctctgct agaaaacaatgatctacaaggagtgaacggaatgaagcattggcataagaaccaacctaaaccctccacaaaccgtcacc actggcaatcccctcaacgacaggccgatcccgtggacatagaaatgacctcatacgccctcctagtgtacggtgataag aaggaattcacagaggggctgcccgtcatgaagtggattacgtcacagagaaatccacatggtggattcagctccacaca ggacaccgttgttgccctgcaagccctatctgagttcgccaagatggcgtacgctgataatttcgacatcaatgctgacg tcacactggactcctctaagaatattgaccacacctttaacataaacgccaagaatgctcttgtgctacagagctatgtg ccaaactacacacctcttcaggtgaaagtctcagctaccggacacggaatgggtctagtccaggtttctgtctttttcaa cgttgaacaagaaattcaggagccaactttcgatctgacagtacagattttagaggagacgatgaattccatcaaagtac aaacatgtacacattggttactgccggacaccagcggtatggcggttcaggagttgggcgtgcccacgggatttgaggcg gatctggagagcatctctaaattagatacacttaaaaagatagaaactgaggatagaaaggtcgtcctgtactttgatga aatatccagtgcacctagctgtgtgacaatggttgccatgagaacgggactggttgctaagtctaagccggctgctgtta gagtctatgattactatgcaccctctaaccaagtgacagcattttacgagtcccacaccctgaaatcctcctctatctgt gacgtgtgtgaggagtgtggctgtcctgcaaagggtcgttag |
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Protein
| Protein ID | pfu_aug2.0_86.1_20185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20185.t1 MIVPLLLAVLASCSLAKDSYVVIVPNDVRPGVQLNVSVNILKATGPVDVKADLLHKTTQNKVATNTKTFNQGSPGVLTVQ VPDTLASGTYELLVLGTNGLHFTNQTDLKYQSKSMSVFIQTDKATYKPGQTVNFRAFAIHPDMSIYTGPIDIDVYDPNTN KIKQYKGLQDASGVVTNFLEMDTKPVLGDWKIKVTAQGRASEKVFTVAHYVLPKFEVTVNLPSYGLTSDNTLSGSVKATY TYGKPVQGKVHVRVRMERWYRPYNYKGAEPMIEQSLSIDGDVKFSLPLDVIKNANRYMNGRDLIVEANVKISQQDDTPIT GAKTQLSMATSVTYELPEPSTTPLYYFGPRTKNYNLPAQTFTVPDTGVVPVQITIPDNATNINLHATYGKISAYRNLQKS YSPSNSYVQLFVKSSRLRAGTAASFDVKSTQPVSELTYQILSRGSIVKAGKVDGSNSKTFSFTIPVNAKMAPNARIVIYY VRTDGEIVTDSISFDVDGVFQNQVSIGFDKAKAQPGDNVNVQVTADPHSLVSLLAVDQSVLLLKSGNDITPEEVISELKS YDTIQDQSSFYGGGGIMPFGRKKRMIFWPYPVYYGGSDAQQIFQNVGVKVMTDAVVYHHKVRHPYYPLPVAGGGFGAGGG GGMFLNGAMAGGAVPNSAFSGSVAGGPAPLQTVQRIHLLPPEEVLEEEAEEKYSRRWQEVLYQIVLLVAERVVQHHFRQF KGSGMSFLRHGFGLIQQWDYQHLAFGAGAEKVDAAMVPPMAPNMVPMPAKPPSNSLKSVDRIRNVFPETWLWTNKTVGIN SGNLSFYRLKNHDNYFPSSSDYPEFAFGGPMVDMAKGNAMAGMAPVPGMVPNPVPMPVKPPSNSLKSVDRIRNVFPETWL WTNTTVGSNGQVSISTTVPDTITSWIASAFAVNKNSGLGIADSTAKIEAFRPFFVSLNLPYSVVLVTLEKNDDFRSIVMQ GGQETFVSSVQTKTVKVAAGKAKSVFFPIVPAALGNIDITVKAQSSMAADGVRRQLLVEPEGVPKEYNVPILIDLKQTST FTTTVPLTLPPGVVAGSEXAGPERVGITAIGDLMGPTVNGLDKLLKMPYGCGEQTMLGFAPDVFVTNYLTATHQLSPDIE DKAVGFMEKGYQRELTFQHKDGSFSAFGDNDKSGSMWLTAFVAKSFHQAKQHIFIDDETLTRAIDWMIARQSKDGSFPEP GRVIHKDMQGGSASGPGLTAFVLISLLENNDLQGVNGMKHWHKNQPKPSTNRHHWQSPQRQADPVDIEMTSYALLVYGDK KEFTEGLPVMKWITSQRNPHGGFSSTQDTVVALQALSEFAKMAYADNFDINADVTLDSSKNIDHTFNINAKNALVLQSYV PNYTPLQVKVSATGHGMGLVQVSVFFNVEQEIQEPTFDLTVQILEETMNSIKVQTCTHWLLPDTSGMAVQELGVPTGFEA DLESISKLDTLKKIETEDRKVVLYFDEISSAPSCVTMVAMRTGLVAKSKPAAVRVYDYYAPSNQVTAFYESHTLKSSSIC DVCEECGCPAKGR |
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