Gene
| Gene Model ID | pfu_aug2.0_86.1_20194 |
|---|---|
| Locus | scaffold86.1 : 274300 ... 293255 : + |
| To GenomeBrowser | scaffold86.1:274300..293255 |
| Genes list of scaffold | scaffold86.1 |
| Synonym | pfu_aug1.0_381.1_36516 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribose-phosphate pyrophosphokinase 1-like isoform x1 | GO:0000287 GO:0004749 GO:0009156 GO:0009165 GO:0016301 GO:0016310 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_86.1_20194.t1 | 3 | 1 | Pribosyltran_N | 24 | 140 | 0.0 | 163.4 | 0.0 | 0.0 | 161.2 |
| pfu_aug2.0_86.1_20194.t1 | 2 | 1 | Pribosyltran | 36 | 59 | 1.2e-11 | 44.4 | 0.69 | 1700.0 | -1.4 |
| pfu_aug2.0_86.1_20194.t1 | 2 | 1 | Pribosyl_synth | 181 | 221 | 3.8e-32 | 111.5 | 7.4e-08 | 0.00018 | 21.2 |
| pfu_aug2.0_86.1_20194.t1 | 2 | 2 | Pribosyltran | 183 | 269 | 1.2e-11 | 44.4 | 2.2e-14 | 5.4e-11 | 42.2 |
| pfu_aug2.0_86.1_20194.t1 | 3 | 2 | Pribosyltran_N | 193 | 202 | 0.0 | 163.4 | 0.95 | 2400.0 | -1.8 |
| pfu_aug2.0_86.1_20194.t1 | 2 | 2 | Pribosyl_synth | 221 | 309 | 3.8e-32 | 111.5 | 1.0e-28 | 2.5e-25 | 89.2 |
| pfu_aug2.0_86.1_20194.t1 | 3 | 3 | Pribosyltran_N | 241 | 268 | 0.0 | 163.4 | 0.5 | 1200.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_86.1_20194.t1 | gi|524909432|ref|XP_005109763.1| | PREDICTED: ribose-phosphate pyrophosphokinase 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_86.1_20194.t1 | gi|524909430|ref|XP_005109762.1| | PREDICTED: ribose-phosphate pyrophosphokinase 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_86.1_20194.t1 | gi|676427300|ref|XP_009044902.1| | hypothetical protein LOTGIDRAFT_223903 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_86.1_20194.t1 | gi|50745642|ref|XP_420181.1| | PREDICTED: ribose-phosphate pyrophosphokinase 1 isoformX2 [Gallus gallus] | 0.0 |
| pfu_aug2.0_86.1_20194.t1 | gi|242023899|ref|XP_002432368.1| | Ribose-phosphate pyrophosphokinase I, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_86.1_20194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20194.t1 atgctgaaacaagttacacgacaaaacattcaacccaagactttggaggcgtacagaaacatgcctaatatcaaggtttt tagtggaagttcccaccacgatttggcacagaaaatctgcgaccgtcttggcatagaacccgggaaagtcgtcacgaaaa agttcagcaacggcgagtgcagtgtggagataggggagtcagttcgaggagaggatgtgtacattgtccagagtggctgt gatgaagttaacgacatgctgatggaactacttataatgatcaacgcatgtaaaatcgcctccgcttgtcgtgtaacggc agttattccatgcttcccctatgccagacaggataaaaaagacaagagtcgagcccccatctcagccaagttagttgcca acatgctgtcggtagctggagctgatcacatcattaccatggatctccatgcttcacagatacagggcttctttgatatt cctgtggacaatctttatgctgagccagcagtactgaagtggataaaggacactatcccagattggagaaatagctgtat tgtatcacctgatgccgggggcgcaaaacgagttacagcaatagccgacagactgaatgtggattttgccctgattcaca aggagaggaagaaggcgaacgaggtggcatcgatggtgttagtaggtgacgttaaagacagggtagccatattggtagat gatatggccgatacatgtggaacattctgtcatgcagctgaaaagttaacggaggcaggggcagctaaagtatacgcaat ttgtactcatggaatattttctggtccagcgatctcacgcatcaataactcagtcttcgagtctgttgttgttaccaata caatacctcaagaggaaagaatgaaacaagctccaaagatcaaaaataccattctgctcaaatcaaatgacctcactggt gcatgtgcagcctattgtttgtcccctggaactgtgcttcggattcatgtgtggatatatgcagtatga |
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Protein
| Protein ID | pfu_aug2.0_86.1_20194.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20194.t1 MLKQVTRQNIQPKTLEAYRNMPNIKVFSGSSHHDLAQKICDRLGIEPGKVVTKKFSNGECSVEIGESVRGEDVYIVQSGC DEVNDMLMELLIMINACKIASACRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDI PVDNLYAEPAVLKWIKDTIPDWRNSCIVSPDAGGAKRVTAIADRLNVDFALIHKERKKANEVASMVLVGDVKDRVAILVD DMADTCGTFCHAAEKLTEAGAAKVYAICTHGIFSGPAISRINNSVFESVVVTNTIPQEERMKQAPKIKNTILLKSNDLTG ACAAYCLSPGTVLRIHVWIYAV |
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