Gene
| Gene Model ID | pfu_aug2.0_86.1_20196 |
|---|---|
| Locus | scaffold86.1 : 359053 ... 367169 : - |
| To GenomeBrowser | scaffold86.1:359053..367169 |
| Genes list of scaffold | scaffold86.1 |
| Synonym | pfu_aug1.0_17518.1_54411 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_86.1_20196.t1 | 2 | 1 | DUF1632 | 4 | 84 | 1.2e-19 | 70.5 | 5.0e-23 | 1.2e-19 | 70.5 |
| pfu_aug2.0_86.1_20196.t1 | 2 | 1 | Sugar_transport | 20 | 30 | 6.4e-08 | 32.0 | 0.23 | 580.0 | -0.7 |
| pfu_aug2.0_86.1_20196.t1 | 2 | 2 | Sugar_transport | 65 | 138 | 6.4e-08 | 32.0 | 2.6e-11 | 6.4e-08 | 32.0 |
| pfu_aug2.0_86.1_20196.t1 | 2 | 2 | DUF1632 | 97 | 107 | 1.2e-19 | 70.5 | 0.35 | 870.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_86.1_20196.t1 | gi|663260975|ref|XP_008492031.1| | PREDICTED: transmembrane protein 144 [Calypte anna] | 0.0 |
| pfu_aug2.0_86.1_20196.t1 | gi|696974099|ref|XP_009556754.1| | PREDICTED: transmembrane protein 144-like [Cuculus canorus] | 0.0 |
| pfu_aug2.0_86.1_20196.t1 | gi|306482546|ref|NP_001107343.2| | transmembrane protein 144 [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_86.1_20196.t1 | gi|160420173|ref|NP_001104203.1| | transmembrane protein 144 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_86.1_20196.t1 | gi|686609925|ref|XP_009281607.1| | PREDICTED: transmembrane protein 144 [Aptenodytes forsteri] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_86.1_20196.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20196.t1 atgacatactcatcttcaatcagaaaaatactatcacctggctctaagagagctgttggtatagtactatcagtaatttc aggagtactttacggtcaaacctttactccctctacatatctacaagaccatggctacaatgaaaatgccttggattatg tatttgcgtgttttgttggcatctactgcactagcactctctattttatcatctacatcatcatcatgaagaacaagcct cgtgtgtaccccaaggctatcctaccgggggtagtgtcagggattatgtgggggatggctaccacagggtggtttgtggc taacaaggtactatcagaagctgtggcatttcctatagtaacaacgggtccctctattatagcatcgttatggggaattc tggtattcaaggaaatcaagtga |
|
Protein
| Protein ID | pfu_aug2.0_86.1_20196.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20196.t1 MTYSSSIRKILSPGSKRAVGIVLSVISGVLYGQTFTPSTYLQDHGYNENALDYVFACFVGIYCTSTLYFIIYIIIMKNKP RVYPKAILPGVVSGIMWGMATTGWFVANKVLSEAVAFPIVTTGPSIIASLWGILVFKEIK |
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