Gene
| Gene Model ID | pfu_aug2.0_86.1_20199 |
|---|---|
| Locus | scaffold86.1 : 401243 ... 419449 : - |
| To GenomeBrowser | scaffold86.1:401243..419449 |
| Genes list of scaffold | scaffold86.1 |
| Synonym | pfu_aug1.0_124580.1_64436 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| oxysterol-binding protein 6 | GO:0006869 GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_86.1_20199.t1 | 1 | 1 | Oxysterol_BP | 354 | 699 | 0.0 | 438.5 | 0.0 | 0.0 | 437.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_86.1_20199.t1 | gi|471370253|ref|XP_004375639.1| | 0.0 | |
| pfu_aug2.0_86.1_20199.t1 | gi|513193950|ref|XP_004942766.1| | PREDICTED: oxysterol-binding protein-related protein 6 isoform X11 [Gallus gallus] | 0.0 |
| pfu_aug2.0_86.1_20199.t1 | gi|676435759|ref|XP_009047661.1| | hypothetical protein LOTGIDRAFT_139282, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_86.1_20199.t1 | gi|524920819|ref|XP_005064683.1| | PREDICTED: oxysterol-binding protein-related protein 6 [Mesocricetus auratus] | 0.0 |
| pfu_aug2.0_86.1_20199.t1 | gi|551492299|ref|XP_005797719.1| | PREDICTED: oxysterol-binding protein-related protein 6-like [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_86.1_20199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20199.t1 atgcggtactttgtgatagagaaaggagtgctcacctacgccaagtcaccatcggacattcagaaagggaagctacatgg agtaatagatttaggtttgtctgtactcgcctttaagaaacaacgtcagagaattgatatagacgctgaggacatcgttt accatatcaaggctaaggagactccagtgtttgaggaatggcttaagcgattaaaacatcatcgtttatatagacaacat gagatagcgtacggcactaaagatttacctcgtctggcggaaatctcctctccacaggaggatctgtccaacccatttcc tgccgctatgcgtcttcctgaagcaatcaacctacaggagaaagtgacgagggagagcatggtaaaagactcaggagaag ttatacgtaaacatagcttcagaaaccagaactcacaaggcaaagtggcaacatggcttcttaacacggctggatttgaa cactgtagtaaagagctgtcagatacgcagaagttactctgtgatttacaagacgatctgaacttaatgacgtcacaatc tctgacatctgacagtgtactggaggctaaagaatcagaatctcaggataagcggaaaataaaaggatttaaggcgagcc ggaggaaagaacggaaaagtgactcctataacagtgatggacagaactctatctttcattcaacaccaagtgctgagttt atacgtacgagtaactctaatcctaacctgaagcagtatgagatagagatgggtggacgtccaagcttgtcagagtcagt aaacgatctaaaactgaaacaaaactttgtggaaaaggctgaaaaaggtcagataccgtctcaaatgggagataactctg ttttccgaaaagactcaatacatccgtctgatgaggaggacatgtctagtgagatatcagaagaaaatgaaacagattat aacgctgctcagagtgtttccgaggaccagctgtcggagacatttgagacgggacgtagagacaagctgccggtaccgaa gccaggtaacagtgacgtgagcctgtggaatatcctatataaaaacatcggcaaagatcttactaagatttcaatgccgg tcactctgaacgagcctttaggaatgttacagagactttgtgaggagatggaatacagtgagttgatagacaaagccacg gaattagaggatccttacgacagaatgctatatatagcagcatttgctgtgagtggttatgctagctcaggatacagggc gggtcacaaaccttttaaccctctccttggagaaagttacgagtgtgtaagggaggacaggggctggagatttgttgcag aacaggtcagtcatcatccaccagtctcggcctgtcatgtggaatctaaaaacttcacattgtttcaagacacgcagatc aaaacaaagttttggggtaaatcaatggagtttcagcccctgggtgaggtccacgtagttataccgaggtacggtgacca ttacacatggaacaaagtgacaacgtgcgtacataacctactcggaggtcagcgatgggtcgatcagtatggagagatga tgatcaaaaacggacttatcagctgtaaacttacctttaaaaaggcgagccagtggtcatcacggcgacacgaggtttat ggccatatcacaaactctgacggtaaacacatacatcacatatatggcaagtggaacgaggcattattctgtggtcatgc tccctcagctaaatgtatttggagaccaggtgctatgccagatgactatgagttatactatggatttagtcgctttgcca tggaacttaacgagattgtaaaggaggaatgcaggttatatccactcacagactccagatatagaccagatcaaaggttg ttagaggagggaaaaatcaaggaagcggaaacggaaaaacaacgattagaacagcttcagagagagcgacgtaaacaacg agaggccgagaaaaccgaatactcaccgctgtggtttaggaaagtcccacatctggataaacagaattacgagtatggag gacaatattgggagagaagaaaagatccgggttttaccaaactctcgtttcccaaactttggtga |
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Protein
| Protein ID | pfu_aug2.0_86.1_20199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20199.t1 MRYFVIEKGVLTYAKSPSDIQKGKLHGVIDLGLSVLAFKKQRQRIDIDAEDIVYHIKAKETPVFEEWLKRLKHHRLYRQH EIAYGTKDLPRLAEISSPQEDLSNPFPAAMRLPEAINLQEKVTRESMVKDSGEVIRKHSFRNQNSQGKVATWLLNTAGFE HCSKELSDTQKLLCDLQDDLNLMTSQSLTSDSVLEAKESESQDKRKIKGFKASRRKERKSDSYNSDGQNSIFHSTPSAEF IRTSNSNPNLKQYEIEMGGRPSLSESVNDLKLKQNFVEKAEKGQIPSQMGDNSVFRKDSIHPSDEEDMSSEISEENETDY NAAQSVSEDQLSETFETGRRDKLPVPKPGNSDVSLWNILYKNIGKDLTKISMPVTLNEPLGMLQRLCEEMEYSELIDKAT ELEDPYDRMLYIAAFAVSGYASSGYRAGHKPFNPLLGESYECVREDRGWRFVAEQVSHHPPVSACHVESKNFTLFQDTQI KTKFWGKSMEFQPLGEVHVVIPRYGDHYTWNKVTTCVHNLLGGQRWVDQYGEMMIKNGLISCKLTFKKASQWSSRRHEVY GHITNSDGKHIHHIYGKWNEALFCGHAPSAKCIWRPGAMPDDYELYYGFSRFAMELNEIVKEECRLYPLTDSRYRPDQRL LEEGKIKEAETEKQRLEQLQRERRKQREAEKTEYSPLWFRKVPHLDKQNYEYGGQYWERRKDPGFTKLSFPKLW |
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