Gene
| Gene Model ID | pfu_aug2.0_86.1_20205 |
|---|---|
| Locus | scaffold86.1 : 499559 ... 506503 : + |
| To GenomeBrowser | scaffold86.1:499559..506503 |
| Genes list of scaffold | scaffold86.1 |
| Synonym | pfu_aug1.0_30478.1_04737 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_86.1_20205.t1 | 1 | 1 | NIT | 126 | 337 | 3.3e-12 | 46.4 | 1.7e-15 | 5.2e-12 | 45.8 |
| pfu_aug2.0_86.1_20205.t1 | 1 | 1 | HNOBA | 378 | 415 | 1.5e-06 | 27.6 | 9.2e-10 | 2.7e-06 | 26.7 |
| pfu_aug2.0_86.1_20205.t1 | 2 | 1 | Guanylate_cyc | 421 | 486 | 3.4e-40 | 137.3 | 6.4e-24 | 1.9e-20 | 73.0 |
| pfu_aug2.0_86.1_20205.t1 | 2 | 2 | Guanylate_cyc | 485 | 568 | 3.4e-40 | 137.3 | 5.9e-22 | 1.8e-18 | 66.5 |
Transcript
| Transcript ID | pfu_aug2.0_86.1_20205.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20205.t1 atggattggataaagaagaaagtggactctcgggtccgaccgtccgtcgttaatgacaattatgaagactccaacaggaa ttctgtggaatcgatgacggcttcacaactcaatatggccgtcatggaaatgttacattcttccggaaccggaaacaaaa attgcgacgccatctgtagagggaatcctatcaccgagtccggtaaacgacaacagttacttaaaatgctgtctatcgtg ttcatcccagtctctgttctactcggaatgaccgctaactccttcattaccactgtcgataactacgtacaatccaaaag tattcggaatagcatcgcgtactccattataggcccggaaacgaaaagcttcctgatgcggcggtacgcagacacggaca acgccctggatcagctccgcacctggaacctccaatcccgggggaagggctcgcagttcgagaccaaagacaggtttctg acgtttttaaatcggcaccgatatcaactggacacgacagtgagaacgtcacgtgacgaaatccagttttatacgggcat tattgaggtgtttctcggttggctgtacgacgaaatcaaagaagcgaggtctgggtccatatggaaaacagtggtcgcct accaagaaataatcgtcgctagtgaatacatcgggagggaaagggcctacggggtcatcttctatgcgtacggcggcttc cggaatcgcgacgagtatattctatttatggaagcacaagacatagctaatgtcacgtttacgtcatgtcggcgatactc agaaattgcgtttcaaacgtacgatatggaaattgcgcaacaagttgaacttctgaatataatcaatgaaatgcggtttg aaattcgatcgaacaattcgaaacatctgagaggatcgcttgcaaaaacgaactcgtggtttgagaacatgacgttgtat caagacgtagtgcggactgttcagaagaagatcgctgaccgcctaaacaacatgctgcaggaggtagagcggcgggactt ggccaatatcgcggtgaccagcgctgtgtttgttgccattgtgatcatctgtccactaatactggccgctgtgtacctgc tgacgtcagagatacagaaatactccattaaaatagcagccagaactaatgcacttaacaaggagaagaggaggaccaat aaattgctgtaccagatgcttccgaagagcatcgccgaaaaactgaaactgaatcaaacggttgaggcagaggagttcca ggaggctacgattttcttcagcgacattgtcggatttaccaaaatctcatctcagagttcaccacttcaggtagtggaca tgttgaacagtttatatctctgctttgatgagaggatctccatgtatgaagtgtacaaagtggagacgatcggtgacgcc tatatggtggtgtctggtcgcgtggttgcaggcgtggttgggagtaagatgccgcggtattgtttgttcggtgagactgt cagcgtggcatccaagatggagtcactaggaaaatcaaataaggttcatattagtcaagtgacacatgacatacttctta aagtgggtggctttgtaatggaggaacgcttagaggaagtcaccaaggctgatcctgagctttcaaatgcctttaaagga gactcgaagacatactggttaaagaagttagcaggtagacggggtagtggggcattgtctgaagccagcactgggacgtc tgaaaaagatgatggagggaaagaggaagatgtcagtggaggtaagggaataatgactgaacaacacacagacagcaggc agggaagtggggcgttatatgaggtttctacaggggtgtctgaaaaagatggagggaaagaggaggatgtcagtggaggt agggaataa |
|
Protein
| Protein ID | pfu_aug2.0_86.1_20205.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20205.t1 MDWIKKKVDSRVRPSVVNDNYEDSNRNSVESMTASQLNMAVMEMLHSSGTGNKNCDAICRGNPITESGKRQQLLKMLSIV FIPVSVLLGMTANSFITTVDNYVQSKSIRNSIAYSIIGPETKSFLMRRYADTDNALDQLRTWNLQSRGKGSQFETKDRFL TFLNRHRYQLDTTVRTSRDEIQFYTGIIEVFLGWLYDEIKEARSGSIWKTVVAYQEIIVASEYIGRERAYGVIFYAYGGF RNRDEYILFMEAQDIANVTFTSCRRYSEIAFQTYDMEIAQQVELLNIINEMRFEIRSNNSKHLRGSLAKTNSWFENMTLY QDVVRTVQKKIADRLNNMLQEVERRDLANIAVTSAVFVAIVIICPLILAAVYLLTSEIQKYSIKIAARTNALNKEKRRTN KLLYQMLPKSIAEKLKLNQTVEAEEFQEATIFFSDIVGFTKISSQSSPLQVVDMLNSLYLCFDERISMYEVYKVETIGDA YMVVSGRVVAGVVGSKMPRYCLFGETVSVASKMESLGKSNKVHISQVTHDILLKVGGFVMEERLEEVTKADPELSNAFKG DSKTYWLKKLAGRRGSGALSEASTGTSEKDDGGKEEDVSGGKGIMTEQHTDSRQGSGALYEVSTGVSEKDGGKEEDVSGG RE |
|