Gene
| Gene Model ID | pfu_aug2.0_86.1_20206 |
|---|---|
| Locus | scaffold86.1 : 508493 ... 519338 : - |
| To GenomeBrowser | scaffold86.1:508493..519338 |
| Genes list of scaffold | scaffold86.1 |
| Synonym | pfu_aug1.0_13600.1_25182 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_86.1_20206.t1 | 2 | 1 | Ank_2 | 195 | 258 | 4.7e-19 | 68.5 | 2.6e-16 | 7.7e-13 | 48.6 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 1 | Ank_5 | 197 | 238 | 2.0e-15 | 56.4 | 9.1e-10 | 2.7e-06 | 27.4 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 1 | Ank | 198 | 229 | 1.9e-19 | 68.3 | 3.2e-06 | 0.0094 | 15.7 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 1 | Ank_3 | 198 | 225 | 2.1e-14 | 52.1 | 2.5e-05 | 0.074 | 13.3 |
| pfu_aug2.0_86.1_20206.t1 | 2 | 1 | Ank_4 | 200 | 250 | 2.0e-12 | 47.2 | 5.3e-13 | 1.6e-09 | 38.0 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 2 | Ank_5 | 217 | 257 | 2.0e-15 | 56.4 | 8.1e-10 | 2.4e-06 | 27.5 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 2 | Ank | 231 | 258 | 1.9e-19 | 68.3 | 9.5e-10 | 2.8e-06 | 26.8 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 2 | Ank_3 | 231 | 258 | 2.1e-14 | 52.1 | 4.0e-07 | 0.0012 | 18.8 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 3 | Ank_5 | 262 | 298 | 2.0e-15 | 56.4 | 2.6e-05 | 0.078 | 13.2 |
| pfu_aug2.0_86.1_20206.t1 | 2 | 2 | Ank_2 | 263 | 295 | 4.7e-19 | 68.5 | 9.4e-07 | 0.0028 | 17.9 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 3 | Ank | 265 | 296 | 1.9e-19 | 68.3 | 2.3e-08 | 6.9e-05 | 22.4 |
| pfu_aug2.0_86.1_20206.t1 | 3 | 3 | Ank_3 | 265 | 292 | 2.1e-14 | 52.1 | 3.0e-06 | 0.0088 | 16.1 |
| pfu_aug2.0_86.1_20206.t1 | 2 | 2 | Ank_4 | 267 | 285 | 2.0e-12 | 47.2 | 0.0034 | 10.0 | 6.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_86.1_20206.t1 | gi|123508829|ref|XP_001329732.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-15 |
| pfu_aug2.0_86.1_20206.t1 | gi|123496352|ref|XP_001326948.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-15 |
| pfu_aug2.0_86.1_20206.t1 | gi|154414451|ref|XP_001580253.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 3.0e-15 |
| pfu_aug2.0_86.1_20206.t1 | gi|123140876|ref|XP_001277361.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 3.0e-15 |
| pfu_aug2.0_86.1_20206.t1 | gi|154421255|ref|XP_001583641.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 4.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_86.1_20206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20206.t1 atgagtagatccgttcctttccgtccgacttctttagacagcataaagcaaaaaccagagaccaaaattcccagacccag agtccaaactactattagagtggagagagaagataggagagtcaaaagttctagaataccaaaatctgcagctgcaaata aacggagagggactgacgaatccatcgggtacaagaaagacgatagagccacacaggcattgaaggaagatggagaaaaa gatttgcaaagatttggggaacacagtttacctgcttctcccgggcaccattcccctccaagttcctgcccacctacccc cttggatgtaccaatccctttggcatcaagtcccaccaatacggattcccccgatgcttctgatgggcgttcccttgctt cgtccgtagcgctggatagtaggtcggcctctactgtgtcggggtccacgtttgggggaggaggtttgtcacgggttccc tccatgcagaggggatcacagctttccatgcagtcctctgtaaatctacagatagagaccccacagcctgaggaatataa cccccgtagtgatggaatacggaaagctagtggcaaaactttattgcatcattgcgcaaactctggagataaaatgaacg tagaaatcctgctgaagagaggcgcccaaacaaataagattgacaagcaaggacaaaccccgctacattacgcagccaag aaagattacgtggaccttattgagatgttggccgttcatggagctaatctggacttcccagaagagaaaacaggtcagag tgctttacacatggcagtgggtaagaactacctggctacagtacaaatactcatgttcagtggagctgatgttaacgtca aggataagatgattgctgactcttgtcttgtgttcatcaacaggtacatagagagtgaagaagatggaagatttgtcacc ttgaatttgtgtgcaaaggaaacacaactgagatcgtactcaactcttggatgctgtcaaaggaaaatcacagaggcaga cttttgtgacaagggatcctgggagtgctattcctggagccattacaggtattttgataaagctattttcagactgacgt acctttgcgattttgacactgtgtag |
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Protein
| Protein ID | pfu_aug2.0_86.1_20206.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_86.1_20206.t1 MSRSVPFRPTSLDSIKQKPETKIPRPRVQTTIRVEREDRRVKSSRIPKSAAANKRRGTDESIGYKKDDRATQALKEDGEK DLQRFGEHSLPASPGHHSPPSSCPPTPLDVPIPLASSPTNTDSPDASDGRSLASSVALDSRSASTVSGSTFGGGGLSRVP SMQRGSQLSMQSSVNLQIETPQPEEYNPRSDGIRKASGKTLLHHCANSGDKMNVEILLKRGAQTNKIDKQGQTPLHYAAK KDYVDLIEMLAVHGANLDFPEEKTGQSALHMAVGKNYLATVQILMFSGADVNVKDKMIADSCLVFINRYIESEEDGRFVT LNLCAKETQLRSYSTLGCCQRKITEADFCDKGSWECYSWSHYRYFDKAIFRLTYLCDFDTV |
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