Gene
| Gene Model ID | pfu_aug2.0_860.1_01195 |
|---|---|
| Locus | scaffold860.1 : 33946 ... 45165 : - |
| To GenomeBrowser | scaffold860.1:33946..45165 |
| Genes list of scaffold | scaffold860.1 |
| Synonym | pfu_aug1.0_7309.1_02421 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquinone biosynthesis monooxygenase coq6 isoform x2 | GO:0016709 GO:0043231 GO:0044444 GO:0044711 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_860.1_01195.t1 | 2 | 1 | FAD_binding_3 | 41 | 272 | 1.4e-08 | 34.2 | 2.4e-10 | 1.8e-06 | 27.2 |
| pfu_aug2.0_860.1_01195.t1 | 2 | 2 | FAD_binding_3 | 303 | 348 | 1.4e-08 | 34.2 | 0.0019 | 14.0 | 4.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_860.1_01195.t1 | gi|676433676|ref|XP_009046978.1| | hypothetical protein LOTGIDRAFT_224896 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_860.1_01195.t1 | gi|589940384|ref|XP_006982925.1| | PREDICTED: ubiquinone biosynthesis monooxygenase COQ6 isoform X2 [Peromyscus maniculatus bairdii] | 0.0 |
| pfu_aug2.0_860.1_01195.t1 | gi|470610891|ref|XP_004315421.1| | PREDICTED: LOW QUALITY PROTEIN: ubiquinone biosynthesis monooxygenase COQ6 [Tursiops truncatus] | 0.0 |
| pfu_aug2.0_860.1_01195.t1 | gi|55741992|ref|NP_001006829.1| | ubiquinone biosynthesis monooxygenase COQ6, mitochondrial [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_860.1_01195.t1 | gi|524913850|ref|XP_005111749.1| | PREDICTED: ubiquinone biosynthesis monooxygenase COQ6-like [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_860.1_01195.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01195.t1 atgacagccaaggtcttgagaagttaccggttgtgtaaatctgtgttaagacattttagatctttatcaggatgtggtag aggtgttcatacaacagttattgataatgatgccgaaacagctgacattgtcatatctggaggagggatggtggggacag caatggcctgtgcacttggtaacgagccacatttagctgacaaaagaatagttctacttgaatctgcaccaaagaaggaa ttcacattaccagagaattacagtaacaggacatgtacagttagtccttctacagtaaatctgcttaacagttttggtgc atgggatgagatcctacagatgagatgtcaaccagtaaagagaatgcaggtatgggaatcctgttctgactccctgatca cgtttaacaaggatgatatgatgggagacctcgcttttgtcgtagagaatgacgttatcctagaggctacgaggcggagt ctcactgccatgggtgatagggtagatgtcatgtataatacgtcagccagctcttacatcataccgggggtcacggcagg tcataaaaacgtcaaccaaaactcatgggtcactatagcaaccaatgatggcaagacaataaagaccaaattattgatag gtgcagatggtatgaactctggtgtaaggaaagctggggaattccatacagtcaagtgggattataaacaactggcatta gtagctactctacatgtcactggtgtatcagagaataccgtagcatggcagagatttctccctacaggtccactagcttt attacctttgtcgacggagcgttgttgtatgatatggaccactacactagaacatgccaggaatctacgtgatttacctg tcgacagctttgtagatgctgttaatgatgctttgggagttaaccttggcttcggggatgtcagctgtttacgtgatatc ttagtacagtcgtcacaggagggtgccgatcctggttccctgtcctacctcacacagtatgagacggagcgacagagagc cgtacttcctgttatagctaccatcgagggattacatcgtctatacagtaccagtctcacgcctgtggttgtactacgga gtctgggattacaagccaccaatgccatgacattccttaaggataagatagtaggccaagcatcaggctga |
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Protein
| Protein ID | pfu_aug2.0_860.1_01195.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01195.t1 MTAKVLRSYRLCKSVLRHFRSLSGCGRGVHTTVIDNDAETADIVISGGGMVGTAMACALGNEPHLADKRIVLLESAPKKE FTLPENYSNRTCTVSPSTVNLLNSFGAWDEILQMRCQPVKRMQVWESCSDSLITFNKDDMMGDLAFVVENDVILEATRRS LTAMGDRVDVMYNTSASSYIIPGVTAGHKNVNQNSWVTIATNDGKTIKTKLLIGADGMNSGVRKAGEFHTVKWDYKQLAL VATLHVTGVSENTVAWQRFLPTGPLALLPLSTERCCMIWTTTLEHARNLRDLPVDSFVDAVNDALGVNLGFGDVSCLRDI LVQSSQEGADPGSLSYLTQYETERQRAVLPVIATIEGLHRLYSTSLTPVVVLRSLGLQATNAMTFLKDKIVGQASG |
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