Gene
| Gene Model ID | pfu_aug2.0_860.1_01198 |
|---|---|
| Locus | scaffold860.1 : 54033 ... 73495 : - |
| To GenomeBrowser | scaffold860.1:54033..73495 |
| Genes list of scaffold | scaffold860.1 |
| Synonym | pfu_aug1.0_4669.1_59573 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| exportin-1-like isoform x1 | GO:0006886 GO:0008536 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_860.1_01198.t1 | 6 | 1 | Xpo1 | 40 | 74 | 1.7e-37 | 128.6 | 0.2 | 750.0 | -0.1 |
| pfu_aug2.0_860.1_01198.t1 | 1 | 1 | IBN_N | 48 | 113 | 3.9e-12 | 45.8 | 4.1e-15 | 1.5e-11 | 44.0 |
| pfu_aug2.0_860.1_01198.t1 | 6 | 2 | Xpo1 | 126 | 253 | 1.7e-37 | 128.6 | 3.5e-40 | 1.3e-36 | 125.7 |
| pfu_aug2.0_860.1_01198.t1 | 6 | 3 | Xpo1 | 534 | 576 | 1.7e-37 | 128.6 | 0.91 | 3400.0 | -2.2 |
| pfu_aug2.0_860.1_01198.t1 | 3 | 1 | CRM1_C | 562 | 653 | 0.0 | 371.0 | 0.0026 | 9.6 | 5.0 |
| pfu_aug2.0_860.1_01198.t1 | 3 | 2 | CRM1_C | 709 | 912 | 0.0 | 371.0 | 0.0 | 0.0 | 292.0 |
| pfu_aug2.0_860.1_01198.t1 | 6 | 4 | Xpo1 | 735 | 783 | 1.7e-37 | 128.6 | 0.01 | 38.0 | 4.1 |
| pfu_aug2.0_860.1_01198.t1 | 6 | 5 | Xpo1 | 809 | 868 | 1.7e-37 | 128.6 | 0.044 | 160.0 | 2.1 |
| pfu_aug2.0_860.1_01198.t1 | 6 | 6 | Xpo1 | 885 | 914 | 1.7e-37 | 128.6 | 0.23 | 860.0 | -0.3 |
| pfu_aug2.0_860.1_01198.t1 | 3 | 3 | CRM1_C | 913 | 1003 | 0.0 | 371.0 | 2.8e-26 | 1.0e-22 | 80.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_860.1_01198.t1 | gi|676433685|ref|XP_009046981.1| | hypothetical protein LOTGIDRAFT_224905 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_860.1_01198.t1 | gi|524913860|ref|XP_005111754.1| | PREDICTED: exportin-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_860.1_01198.t1 | gi|260830375|ref|XP_002610136.1| | hypothetical protein BRAFLDRAFT_264300 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_860.1_01198.t1 | gi|499000135|ref|XP_004554652.1| | 0.0 | |
| pfu_aug2.0_860.1_01198.t1 | gi|554879394|ref|XP_005949509.1| | PREDICTED: exportin-1-like isoform X1 [Haplochromis burtoni] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_860.1_01198.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01198.t1 atgccacccatagcgatgagttcgggtaacctaacagaggaagcgtccaagctgctggactttaaccagaagctggacat caacctgttagataatgttgtaactgtcatgtatactggtaatggaccacagcaacggacagcacaggaagttttgacca ctctaaaggagcaccctgactcctggactcgtgtagacacaatactagaatactctaataaccaacaaacaaagtactat gctctacagattctagaaaatgtcatcaaaacaaagtggaaggtcttacctcgggctcaatgtgaaggaataaaaaagta cattgttggactcattattaagacttcatctgaggcagggacactagagaaagagaaagtttatttaggaaagctgaata tgattctagtacagattctgaagtatgaatggcctcgtaactggccatcgtttatcagtgatatcgtaggggctagcaaa acaaatgagtctttgtgtcagaacaacctagtgatacttaaacttctcagtgaagaggtgtttgactacagtagtggaca gatgacacaagctaaagccaaacatcttaaagacagtatgtgtagtgaattctcctctatcttccagctctgtcagtttg tcatggataactctcagaatgccccattagtaggatccacattggagaccttgctcagatttcttaattggattcctcta ggctatatatttgaaacaaaactaatcaccacattgatatacaaggtacgtcatatcttttctactatttgtataattgg ttatacagctgccgttgtagttggagcacagtacgatgaacagtttgtccatctgtttactctcacaatgacacaactta aacagatgctgccattacaaacaaatctcaaggatgcgtatcagaggggaacagacgacgaacaaaagttcatccaaaac ttgagtctctttatatgtacatacctcaaagaacacggatcactgatagagaagaaatcagatctacatgaaaatctgct agaggcacttcattacctgatcctaatatctgaagtggaggaagttgagatctttaagataacgttagaatactggaaca cgttaacagctgatttatacagagagagcccctttacagccagttcatcccccctcctcatcggcaagtcacatcacaat gagatgccacccagaagacagctctataatcaagtactctcaagggtaagaagagtgatgatatccagaatggctaagcc agaagaagtgttaattgtagagaatgagcagggagaagtggtcagagaattccttaaagatacagactctattaatcttt ataaaaacatgagagaaacactagtttacctgacacatttggattatgctgatacagaatcaatcatgacggagaagcta cacaatcaagtaaatggcacagagtggtcatggaagaatctcaatacgttatgctgggctattggatctattagtggagc tatgcatgaagatgatgaaaagagattcttagtcaccgtaatcaaggatttattagggttgtgtgaacagaagaggggta aggacaacaaagctatagtggcatctaacattatgtacgtagtgggacagtacccaaggttcctacgagctcactggaag ttcctgaaaactgttgttaacaaactgtttgaatttatgcatgaaactcacgatggtgtccaggacatggcatgcgatac ctttatcaaaatcgcccagaaatgtcggcggcattttgtgcaagtccaagtaggcgaggtcatgccgttcatagaggaaa tactaaatggtatcaacacaatcatctgtgacttacagcctcaacaggtacatactttctatgaggctgttggcatgatg ataaacgctcagaatgaccaggtggcccaggaacacttgatagaacgttatctgctcttacctaaccaggtgtgggatgg aatcattaatcaggccacacagaatgtagaggttcttaaagaccctgatgctgtcaaacagctaggaaatatactgaaaa caaacgtcagggcctgtaaggcacttggtcatccgtatgtagtacagctaggtagaatatacctggacatgttgaatgtt tacaaggtaatgagtgagaacataagcagtgcaatagctacaaatggtgagacggtcaccaaacagccgttgatacgcag catgagaacagtcaaaaaggaaacgttaaaactcatctccggctgggtcagccgatccaatgatccacaaatggtagcag agaatttcatccccccattattagatgcagtattacttgattaccagagaaacgtatcggcagctcgtgaaccagaagtt cttagtactatggcaactattgtcaacagattagagagctatatcacaaaagacatcccccagatctttgatgctgtatt tgagtgtaccttagaaatgatcaataaagactttgaggaattcccagaacatagaaccaatttcttccttctccttcaag cagtcaattctcattgtttccaagctttcctcagtatcccaccagcacagttcaagttagtgttagactcggtaatatgg gcattcaaacacaccatgaggaatgtagctgacacgggattggacatcttattcacgttattacagaatgtagccaatga ggaacaagcggcacagagtttgacaatgcaggcgtccattctagcgtacatgttctcactactggagaatggcaaggtaa ctgtggcattggattccagcgcacaggcagcacagaatgtatcatatatacaatctttcctcatgaacctactcaaggca gctttccctcatcttaatgatgcccagatcaaactgttcattgaaggattattcagctttgaccaagacatcccagcttt caaagaacatctcagagatttcctggtgcagattagggaatatgctggtgaagacaatcaggatttattcctagaggaga gagagacagccattaaacaagcccaagaggagaaacggaaagtgcaattgtcagtgccaggaattctaggacctcacgag atacctgaagagatgcaagactga |
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Protein
| Protein ID | pfu_aug2.0_860.1_01198.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01198.t1 MPPIAMSSGNLTEEASKLLDFNQKLDINLLDNVVTVMYTGNGPQQRTAQEVLTTLKEHPDSWTRVDTILEYSNNQQTKYY ALQILENVIKTKWKVLPRAQCEGIKKYIVGLIIKTSSEAGTLEKEKVYLGKLNMILVQILKYEWPRNWPSFISDIVGASK TNESLCQNNLVILKLLSEEVFDYSSGQMTQAKAKHLKDSMCSEFSSIFQLCQFVMDNSQNAPLVGSTLETLLRFLNWIPL GYIFETKLITTLIYKVRHIFSTICIIGYTAAVVVGAQYDEQFVHLFTLTMTQLKQMLPLQTNLKDAYQRGTDDEQKFIQN LSLFICTYLKEHGSLIEKKSDLHENLLEALHYLILISEVEEVEIFKITLEYWNTLTADLYRESPFTASSSPLLIGKSHHN EMPPRRQLYNQVLSRVRRVMISRMAKPEEVLIVENEQGEVVREFLKDTDSINLYKNMRETLVYLTHLDYADTESIMTEKL HNQVNGTEWSWKNLNTLCWAIGSISGAMHEDDEKRFLVTVIKDLLGLCEQKRGKDNKAIVASNIMYVVGQYPRFLRAHWK FLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFVQVQVGEVMPFIEEILNGINTIICDLQPQQVHTFYEAVGMM INAQNDQVAQEHLIERYLLLPNQVWDGIINQATQNVEVLKDPDAVKQLGNILKTNVRACKALGHPYVVQLGRIYLDMLNV YKVMSENISSAIATNGETVTKQPLIRSMRTVKKETLKLISGWVSRSNDPQMVAENFIPPLLDAVLLDYQRNVSAAREPEV LSTMATIVNRLESYITKDIPQIFDAVFECTLEMINKDFEEFPEHRTNFFLLLQAVNSHCFQAFLSIPPAQFKLVLDSVIW AFKHTMRNVADTGLDILFTLLQNVANEEQAAQSLTMQASILAYMFSLLENGKVTVALDSSAQAAQNVSYIQSFLMNLLKA AFPHLNDAQIKLFIEGLFSFDQDIPAFKEHLRDFLVQIREYAGEDNQDLFLEERETAIKQAQEEKRKVQLSVPGILGPHE IPEEMQD |
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