Gene
| Gene Model ID | pfu_aug2.0_860.1_01199 |
|---|---|
| Locus | scaffold860.1 : 74076 ... 95066 : + |
| To GenomeBrowser | scaffold860.1:74076..95066 |
| Genes list of scaffold | scaffold860.1 |
| Synonym | pfu_aug1.0_4669.1_59574 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein 410 isoform x3 | GO:0005488 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_860.1_01199.t1 | 7 | 1 | zf-H2C2_2 | 148 | 155 | 2.3e-15 | 56.0 | 5.7 | 12000.0 | -3.1 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 1 | zf-C2H2_4 | 152 | 166 | 2.3e-09 | 36.9 | 3.8 | 8100.0 | -2.4 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 1 | zf-C2H2 | 153 | 169 | 1.2e-15 | 56.7 | 1.0 | 2200.0 | -0.7 |
| pfu_aug2.0_860.1_01199.t1 | 7 | 2 | zf-H2C2_2 | 191 | 207 | 2.3e-15 | 56.0 | 0.15 | 320.0 | 1.9 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 2 | zf-C2H2 | 195 | 218 | 1.2e-15 | 56.7 | 1.5e-05 | 0.031 | 14.6 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 2 | zf-C2H2_4 | 195 | 218 | 2.3e-09 | 36.9 | 0.00024 | 0.51 | 10.8 |
| pfu_aug2.0_860.1_01199.t1 | 3 | 1 | zf-C2H2_jaz | 201 | 212 | 3.1e-07 | 30.3 | 1.5 | 3100.0 | -1.6 |
| pfu_aug2.0_860.1_01199.t1 | 7 | 3 | zf-H2C2_2 | 210 | 237 | 2.3e-15 | 56.0 | 1.9e-05 | 0.041 | 14.1 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 3 | zf-C2H2 | 224 | 248 | 1.2e-15 | 56.7 | 4.7e-05 | 0.1 | 13.0 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 3 | zf-C2H2_4 | 224 | 248 | 2.3e-09 | 36.9 | 0.0055 | 12.0 | 6.5 |
| pfu_aug2.0_860.1_01199.t1 | 7 | 4 | zf-H2C2_2 | 241 | 265 | 2.3e-15 | 56.0 | 1.7e-08 | 3.7e-05 | 23.8 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 4 | zf-C2H2 | 254 | 276 | 1.2e-15 | 56.7 | 1.8e-08 | 3.9e-05 | 23.7 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 4 | zf-C2H2_4 | 254 | 276 | 2.3e-09 | 36.9 | 1.5e-06 | 0.0033 | 17.6 |
| pfu_aug2.0_860.1_01199.t1 | 3 | 2 | zf-C2H2_jaz | 254 | 276 | 3.1e-07 | 30.3 | 1.9e-08 | 4.0e-05 | 23.6 |
| pfu_aug2.0_860.1_01199.t1 | 7 | 5 | zf-H2C2_2 | 268 | 285 | 2.3e-15 | 56.0 | 1.0e-07 | 0.00022 | 21.3 |
| pfu_aug2.0_860.1_01199.t1 | 7 | 6 | zf-H2C2_2 | 313 | 328 | 2.3e-15 | 56.0 | 3.1e-06 | 0.0065 | 16.7 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 5 | zf-C2H2 | 318 | 340 | 1.2e-15 | 56.7 | 1.6e-07 | 0.00033 | 20.7 |
| pfu_aug2.0_860.1_01199.t1 | 5 | 5 | zf-C2H2_4 | 318 | 340 | 2.3e-09 | 36.9 | 4.6e-06 | 0.0096 | 16.1 |
| pfu_aug2.0_860.1_01199.t1 | 3 | 3 | zf-C2H2_jaz | 318 | 338 | 3.1e-07 | 30.3 | 0.00015 | 0.31 | 11.2 |
| pfu_aug2.0_860.1_01199.t1 | 7 | 7 | zf-H2C2_2 | 335 | 341 | 2.3e-15 | 56.0 | 0.33 | 690.0 | 0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_860.1_01199.t1 | gi|507530781|ref|XP_004649474.1| | PREDICTED: zinc finger protein 410 isoform X2 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_860.1_01199.t1 | gi|507530779|ref|XP_004649473.1| | PREDICTED: zinc finger protein 410 isoform X1 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_860.1_01199.t1 | gi|354486029|ref|XP_003505184.1| | PREDICTED: zinc finger protein 410 isoform X1 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_860.1_01199.t1 | gi|625204975|ref|XP_007643868.1| | PREDICTED: zinc finger protein 410 isoform X2 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_860.1_01199.t1 | gi|524913854|ref|XP_005111751.1| | PREDICTED: zinc finger protein 143-like isoform X1 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_860.1_01199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01199.t1 atggaacatatacaaataagccatcgccttaacacaatatcaacagctgtcaattccacagagaatacatcttccacagt aaacgattttgtagaagatggcaaccagacaaccctgacctcagtgccagaggtcatgacctcacctgcagtcaacttta tgcttcttagagacatacttggagttgatcagggaagcacttcaatgcctgctgtaacagaagaaaaaatcatggacagt gattataatcatatatttgcggtggctcaggcaaatttggtcgctcagacccaacaagacatagccctacagttggttga acagagtcaaggtcatctaagtgagctttatgaaggatcacaagagccgaccaatcaaagctttactaagtgttcaaact ctcccttaattgctgacaatgaaaacaagctgtcaaatacagagaaaaaaatagcttgtcctatacaaatgggaggatgt acgaccaccacaaaacgcaatgaaaatgacaagaattcctcagccagtcagcaaaatgtagtgacgatttcaactaagaa gttgatgaaagttgagaagttgaaatgtggaatagagggctgtgacagatcatttgtatataaggcacatctcaaatatc acaagcttactcacagtaatgacagaagattccattgtgaggtggaggggtgtgggcagtcattctacacagcacagaga ctgaaggttcactcccgaatccataatggaacacgtccatttgtatgtgaggagtgtaacagaggttttactactgccgg aaacctgaaaaatcacaaaagaactcactctggagaacgaccatatgtgtgtcctatgaaggatgtcagaaaagctttgc agagaactctacccttcaaaaacatctcagaacacatacagtataaatactacacaagaagagagaaacccttcaagtgt gcggtctgtgataaagccttcagtcaaagtagcagtcgtgctcagcacatgaagaaacaccttatagaggagaaggacaa atggctgacggaaagtcaactcagtagtgatgccagcggagtaatacaggaaccggaaggaagcagcagccaagctccga aacagtcagaattaccgctagatggcgttgcgttgaatgatagttcacagactccgttgtcttcttgtcaacttgacttt gttcctggacatacaactttgttgacttttgttcataaagtcgatggtctgagtgtggacaacgctgaaaaacaaataat cattatacaagaacctggacaacatgtactgcaggtcccatctaacccatgtagtgaagggataagaagtgaaggccaag tgtatgtgatcaaggatttgtatcaacaatag |
|
Protein
| Protein ID | pfu_aug2.0_860.1_01199.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01199.t1 MEHIQISHRLNTISTAVNSTENTSSTVNDFVEDGNQTTLTSVPEVMTSPAVNFMLLRDILGVDQGSTSMPAVTEEKIMDS DYNHIFAVAQANLVAQTQQDIALQLVEQSQGHLSELYEGSQEPTNQSFTKCSNSPLIADNENKLSNTEKKIACPIQMGGC TTTTKRNENDKNSSASQQNVVTISTKKLMKVEKLKCGIEGCDRSFVYKAHLKYHKLTHSNDRRFHCEVEGCGQSFYTAQR LKVHSRIHNGTRPFVCEECNRGFTTAGNLKNHKRTHSGERPYVCPMKDVRKALQRTLPFKNISEHIQYKYYTRREKPFKC AVCDKAFSQSSSRAQHMKKHLIEEKDKWLTESQLSSDASGVIQEPEGSSSQAPKQSELPLDGVALNDSSQTPLSSCQLDF VPGHTTLLTFVHKVDGLSVDNAEKQIIIIQEPGQHVLQVPSNPCSEGIRSEGQVYVIKDLYQQ |
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