Gene
| Gene Model ID | pfu_aug2.0_860.1_01201 |
|---|---|
| Locus | scaffold860.1 : 108899 ... 113635 : - |
| To GenomeBrowser | scaffold860.1:108899..113635 |
| Genes list of scaffold | scaffold860.1 |
| Synonym | pfu_aug1.0_4669.1_59575 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_860.1_01201.t1 | 2 | 1 | Ank_2 | 44 | 58 | 5.9e-11 | 42.5 | 2.3 | 4300.0 | -1.9 |
| pfu_aug2.0_860.1_01201.t1 | 2 | 2 | Ank_2 | 118 | 308 | 5.9e-11 | 42.5 | 4.0e-06 | 0.0074 | 16.6 |
| pfu_aug2.0_860.1_01201.t1 | 6 | 1 | Ank | 136 | 153 | 3.2e-06 | 26.6 | 0.0015 | 2.8 | 7.9 |
| pfu_aug2.0_860.1_01201.t1 | 6 | 2 | Ank | 172 | 188 | 3.2e-06 | 26.6 | 1.2 | 2200.0 | -1.2 |
| pfu_aug2.0_860.1_01201.t1 | 6 | 3 | Ank | 286 | 308 | 3.2e-06 | 26.6 | 0.0058 | 11.0 | 6.0 |
| pfu_aug2.0_860.1_01201.t1 | 6 | 4 | Ank | 317 | 333 | 3.2e-06 | 26.6 | 1.2 | 2200.0 | -1.2 |
| pfu_aug2.0_860.1_01201.t1 | 6 | 5 | Ank | 435 | 453 | 3.2e-06 | 26.6 | 0.028 | 52.0 | 3.9 |
| pfu_aug2.0_860.1_01201.t1 | 6 | 6 | Ank | 472 | 480 | 3.2e-06 | 26.6 | 6.7 | 12000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_860.1_01201.t1 | gi|390343602|ref|XP_798405.3| | 2.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_860.1_01201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01201.t1 atgctagagcacaagaggtatcatatgttggacgccgcgttgtacacaaaatacgttctctggatacgagtttttcgtag ttcgttcattagtttttctggctactcaacattgatcgcttgtgaaaaagcattggcaagaaacgataccaaagcttgtg agatgcttgttccaactttgaacaaagataacaatccttacatctggaatgagaaattgacaacattacttgataaggtg ttccttattaatgatgacaaatgcttggatatcattattcccttctttaagagagaagttttcaataaatacaaaaagaa atgtatttataaattagtgcaaagaagttttggtaacaaggctgtactgcaaagtctgttgaggcatgacgtgtttccgg tcagtacgtgcctcagtatcgcagttaaagaagataatctcgatatagtccaacttcttaaggataagttatacataaaa gagcacaaatacagcgttccattacttgttcaggctactctaaacgattccgataacatgttgagagttctactaggaca tcctccgtgtagactgaaggcaaagtggtgtggtggtttcaacactctggtgtatacttacagtggttactctgtagttc agctggcgagagacttgggcttcacacagtgtctggaagttctggtgaatgcagggttacctaacgatcaaaacattgcc aaaatcttgccaataataaattttgtgtacggagtagaatctacaaaatattccagtgctgaactagtaaataggttagc gaaatctggttatggtgtgaacacctgtatcgaatgcggcggtaccaagttccctccactttatgacgctatcgtgaaga aagaattggacatgataaaagctttacttgcagctggtgccaccttgtttganccattacttgttcaggctactctaaac gattccgataacatgttgagagttctactaggacatcctccgtgtagactgaaggcaaagtggtgtggtggtttcaacac tctggtgtatacttacagtggttactctgtagttcagctggcgagagacttgggcttcacacagtgtctggaagttctgg tgaatgcagggttacctaacgatcaaaacaatgccaaaatcttgccaataataaattttgtgtacggagtagaatctaca aaatattccagtgctgaactagtaaataggttagcgaaatctggttatggtgtgaacacctgtatcgaatgcggcggtac caagttccctccaatttatgacgctatcgtgaagaaagaattggacatgataaaagctttacttgcagctggtgccacct tgtttggcgtaaaagatgtcacaattttaggttgccctccgcgtctattggcggaattcatacatcacaacgccgatatc tgtactgaaaaaggatcagttctgaacagtattctagaagtacaaaacccaaatcgagaaaaacttttgcatcttgtcct gaactgtgctcacactattccaagggcagacagagacagatttcaagaattgagtaaagacatgagcttttatgggtacc aaaagattaacgaatttttgacatcgactcgcagacttacattgctatctcgagatgctttacggagacattatggacac cgtattcacgcttacattgatacagaatgtttaccacctattattgcagactttctcaattgcaggcaagctttaaaacc gtttctcgatcgtcctttggaatttaccaaagcctttgaaccaatggatagtgaaagctttgtttgttactttcctgaac attattaa |
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Protein
| Protein ID | pfu_aug2.0_860.1_01201.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01201.t1 MLEHKRYHMLDAALYTKYVLWIRVFRSSFISFSGYSTLIACEKALARNDTKACEMLVPTLNKDNNPYIWNEKLTTLLDKV FLINDDKCLDIIIPFFKREVFNKYKKKCIYKLVQRSFGNKAVLQSLLRHDVFPVSTCLSIAVKEDNLDIVQLLKDKLYIK EHKYSVPLLVQATLNDSDNMLRVLLGHPPCRLKAKWCGGFNTLVYTYSGYSVVQLARDLGFTQCLEVLVNAGLPNDQNIA KILPIINFVYGVESTKYSSAELVNRLAKSGYGVNTCIECGGTKFPPLYDAIVKKELDMIKALLAAGATLFXPLLVQATLN DSDNMLRVLLGHPPCRLKAKWCGGFNTLVYTYSGYSVVQLARDLGFTQCLEVLVNAGLPNDQNNAKILPIINFVYGVEST KYSSAELVNRLAKSGYGVNTCIECGGTKFPPIYDAIVKKELDMIKALLAAGATLFGVKDVTILGCPPRLLAEFIHHNADI CTEKGSVLNSILEVQNPNREKLLHLVLNCAHTIPRADRDRFQELSKDMSFYGYQKINEFLTSTRRLTLLSRDALRRHYGH RIHAYIDTECLPPIIADFLNCRQALKPFLDRPLEFTKAFEPMDSESFVCYFPEHY |
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