Gene
| Gene Model ID | pfu_aug2.0_860.1_01202 |
|---|---|
| Locus | scaffold860.1 : 119625 ... 130815 : - |
| To GenomeBrowser | scaffold860.1:119625..130815 |
| Genes list of scaffold | scaffold860.1 |
| Synonym | pfu_aug1.0_13336.1_10593 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_860.1_01202.t1 | 2 | 1 | Galactosyl_T | 33 | 59 | 6.3e-09 | 35.7 | 0.049 | 360.0 | 0.6 |
| pfu_aug2.0_860.1_01202.t1 | 2 | 2 | Galactosyl_T | 92 | 143 | 6.3e-09 | 35.7 | 5.9e-12 | 4.4e-08 | 32.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_860.1_01202.t1 | gi|736244330|ref|XP_010785955.1| | PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2-like [Notothenia coriiceps] | 5.0e-07 |
| pfu_aug2.0_860.1_01202.t1 | gi|542236744|ref|XP_005456256.1| | PREDICTED: putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC402377-like [Oreochromis niloticus] | 7.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_860.1_01202.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01202.t1 atgcgatgtgacagattcaagataagaatcaagggtcctctagacatccgtaagatccgcctggtttctattgttatatt actggtgataacatggacatatcttttcactgtgaacataacacaaactctaacacagagacaagttcgaaggacacact acaataatgatgaaattaccttcaatataaatgagaaaagtatttgtgatggaagcaggaatagtgatttagaaattctt gttgccatagtttcgagttttgatgaatactggcagagagattacatccgggcaacatggggaaacgatgccaagaaaag tccgaaaatgaggatattgtttatcgtggggacttctgttgaggacagccctgataccccctccatccaggaagaaagtt ataaatttggagatatcgttcaagatgcatatgcgtgtgaagcttataatatccatatctatgtgctcaatgtgttctat aaatag |
|
Protein
| Protein ID | pfu_aug2.0_860.1_01202.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_860.1_01202.t1 MRCDRFKIRIKGPLDIRKIRLVSIVILLVITWTYLFTVNITQTLTQRQVRRTHYNNDEITFNINEKSICDGSRNSDLEIL VAIVSSFDEYWQRDYIRATWGNDAKKSPKMRILFIVGTSVEDSPDTPSIQEESYKFGDIVQDAYACEAYNIHIYVLNVFY K |
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