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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_8607.1_26288
Locus scaffold8607.1 : 1 ... 4375 : -
To GenomeBrowser scaffold8607.1:1..4375
Genes list of scaffold scaffold8607.1
Synonym pfu_aug1.0_785.1_65622

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_8607.1_26288.t1 1 1 MFS_1 23 109 4.6e-07 28.8 2.1e-10 5.3e-07 28.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_8607.1_26288.t1 gi|170036382|ref|XP_001846043.1| monocarboxylate transporter [Culex quinquefasciatus] 1.0e-19

Transcript
Transcript IDpfu_aug2.0_8607.1_26288.t1
Definition-
>pfu_aug2.0_8607.1_26288.t1
atgcctagttgtgaaggttgctcaaaggattgccattacggctgggttgtagtggtagccgctgcccttatacggatcct
tgtttacggtataagctatacgtcaggggtagtgtatgtcgtcatcatagaaaacttcaacactaaaagaggagaaacag
catggatagcatcaatcttaacagcagtgacatttttagtatctccactttccggtgttttgttgaaccgtttcggatat
cgtgcagtgacatttcttggtggaatcctatgtttcgtggggttggcattaagtcagttcgtcaagaatctcattctact
gtgtttcacatacggcataataacag

Protein
Protein IDpfu_aug2.0_8607.1_26288.t1
Definition-
>pfu_aug2.0_8607.1_26288.t1
MPSCEGCSKDCHYGWVVVVAAALIRILVYGISYTSGVVYVVIIENFNTKRGETAWIASILTAVTFLVSPLSGVLLNRFGY
RAVTFLGGILCFVGLALSQFVKNLILLCFTYGIIT

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