Gene
| Gene Model ID | pfu_aug2.0_862.1_07959 |
|---|---|
| Locus | scaffold862.1 : 76776 ... 87629 : + |
| To GenomeBrowser | scaffold862.1:76776..87629 |
| Genes list of scaffold | scaffold862.1 |
| Synonym | pfu_aug1.0_4712.1_37953 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium hydrogen exchanger 1-like isoform x2 | GO:0015297 GO:0015672 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_862.1_07959.t1 | 1 | 1 | Na_H_Exchanger | 82 | 181 | 1.6e-11 | 43.4 | 3.9e-15 | 2.0e-11 | 43.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_862.1_07959.t1 | gi|676435651|ref|XP_009047626.1| | hypothetical protein LOTGIDRAFT_172492 [Lottia gigantea] | 5.0e-36 |
| pfu_aug2.0_862.1_07959.t1 | gi|585679844|ref|XP_006819593.1| | PREDICTED: Na(+)/H(+) exchanger protein 7-like [Saccoglossus kowalevskii] | 2.0e-29 |
| pfu_aug2.0_862.1_07959.t1 | gi|524908293|ref|XP_005109249.1| | PREDICTED: sodium/hydrogen exchanger 1-like [Aplysia californica] | 3.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_862.1_07959.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07959.t1 atgttgttggcgtatcattgtctgctcctgtcagtggctattatagcggtccacaccaatcctgtcgatgttaaccgtac tgtaaagctcaactcaaatggcactgatcagtacacggtatcgaacaatcacagccgagataacaagtctgagggacatg gccatgatgagagtgaggagcatggggtagagctggtagagatcaagtttgaggagaataaagaacctatcatatttacc ttagtggttgttatagcaggacttagtcagataggttttcatcatgctaacaagctgtcatctatcgtacccgagtcttg cttattaattgtgctaggagtaatatttggaggaatattttttgggagtggtgtatcagagagccttccacagtttttca cacccacctctttcttccattacctgttaccaccgataattctggaggcatcctttagtctgtatgacaagacgttcatg gacaatattggcagcgtcctgtgttttgccgtaatagggacaacaatctcatgctttgctatagatttttag |
|
Protein
| Protein ID | pfu_aug2.0_862.1_07959.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07959.t1 MLLAYHCLLLSVAIIAVHTNPVDVNRTVKLNSNGTDQYTVSNNHSRDNKSEGHGHDESEEHGVELVEIKFEENKEPIIFT LVVVIAGLSQIGFHHANKLSSIVPESCLLIVLGVIFGGIFFGSGVSESLPQFFTPTSFFHYLLPPIILEASFSLYDKTFM DNIGSVLCFAVIGTTISCFAIDF |
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