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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_862.1_07960
Locus scaffold862.1 : 87676 ... 102640 : +
To GenomeBrowser scaffold862.1:87676..102640
Genes list of scaffold scaffold862.1
Synonym pfu_aug1.0_26585.1_55162

Manual annotation
Transcript
Transcript IDpfu_aug2.0_862.1_07960.t1
Definition-
>pfu_aug2.0_862.1_07960.t1
atgcaggcctataataagatcacacagtctggaggatctgtagatgcagtacatattgtgcttggatttctcaagttctt
cattgtatgccttggaggcctccttataggggttctagtgggtcttctatctgctatactcaccaagtacacacacaaag
tcaaagttgtagaacctgtagctatatttggaatggcgtacttggcgtttctgatagccgagttgtttgagttttctggt
attatatgtatcattggctgtgggcttgttcaggtggcgtatgccttccacaacatcaccagcaaatcaaaagtagccat
caaatatttttctaaagtactcagtacaacttcagagattatcatattcttgtttttgggcctgtcagtatataaggagc
ccttcgtctggaacacaggctttgttctgtggacattgtttctgtgtattgtctttagatttgcaattacttacataatg
tccatcatcatcaacaaagtagatgtgtatagagtgaggaaaattggatatgatgaaatgttcataatgagttatggtgg
actacgtggtgccgtgtgtttttctctcgtagcgttgttagatgagaagtactttccccagaggccgttattccatacca
ccaccctcatcgtcatactatttactgtattcttacaaggtgctacaataaaaccacttgtaaagttacttcatgttcgc
cgagcacaggccagtgatttatctatgtatcaggagctcaatgaaaagaatcctgtcactagatttgagtcaaatctaca
aggtatgaggaaacttcatgtagtgaaccagttacgtaacaaacggagcagcaacatgaggcttgccaggatgaacacca
tccgtaagatgccggagcgagcgttatcatggtcggagtccgactctgacctgtgtcagctaagggaggcaagcacgagt
caacatggactgaaggagagagctaaaaccatggatatgaccaccatacctaatactcttgagggatttacaaatcgctc
catcgatacacctgtgatagaggaagaacctgaagatatagatccacgtgaatcaaaccctttactccggaatggtgcca
cccaggataactgtgagaccgcccctcactctgagcactgtcagctacaacggcaggacgcagtcacggaaaatataccc
ctgggacagatcggcaaaactaaatcacagtga
Transcript IDpfu_aug2.0_862.1_07960.t2
Definition-
>pfu_aug2.0_862.1_07960.t2
atgcaggcctataataagatcacacagtctggaggatctgtagatgcagtacatattgtgcttggatttctcaagttctt
cattgtatgccttggaggcctccttataggggttctagtgggtcttctatctgctatactcaccaagtacacacacaaag
tcaaagttgtagaacctgtagctatatttggaatggcgtacttggcgtttctgatagccgagttgtttgagttttctggt
attatatgtatcattggctgtgggcttgttcaggtggcgtatgccttccacaacatcaccagcaaatcaaaagtagccat
caaatatttttctaaagtactcagtacaacttcagagattatcatattcttgtttttgggcctgtcagtatataaggagc
ccttcgtctggaacacaggctttgttctgtggacattgtttctgtgtattgtctttagatttgcaattacttacataatg
tccatcatcatcaacaaagtagatgtgtatagagtgaggaaaattggatatgatgaaatgttcataatgagttatggtgg
actacgtggtgccgtgtgtttttctctcgtagcgttgttagatgagaagtactttccccagaggccgttattccatacca
ccaccctcatcgtcatactatttactgtattcttacaaggtgctacaataaaaccacttgtaaagttacttcatgttcgc
cgagcacaggccagtgatttatctatgtatcaggagctcaatgaaaagagaaaactgggaaaacagggtgctctggactt
agtgaacaggacagtaggctgtaactcagtcttcatattgtttgagtag
Transcript IDpfu_aug2.0_862.1_07960.t3
Definition-
>pfu_aug2.0_862.1_07960.t3
atgaggaaacttcatgtagtgaaccagttacgtaacaaacggagcagcaacatgaggcttgccaggatgaacaccatccg
taagatgccggagcgagcgttatcatggtcggagtccgactctgacctgtgtcagctaagggaggcaagcacgagtcaac
atggactgaaggagagagctaaaaccatggatatgaccaccatacctaatactcttgagggatttacaaagaaacctaag
aaagttaataggagtcgctccatcgatacacctgtgatagaggaagaacctgaagatatagatccacgtgaatcaaaccc
tttactccggaatggtgccacccaggataactgtgagaccgcccctcactctgagcactgtcagctacaacggcaggacg
cagtcacggaaaatatacccctgggacagatcggcaaaactaaatcacagtga

Protein
Protein IDpfu_aug2.0_862.1_07960.t1
Definition-
>pfu_aug2.0_862.1_07960.t1
MQAYNKITQSGGSVDAVHIVLGFLKFFIVCLGGLLIGVLVGLLSAILTKYTHKVKVVEPVAIFGMAYLAFLIAELFEFSG
IICIIGCGLVQVAYAFHNITSKSKVAIKYFSKVLSTTSEIIIFLFLGLSVYKEPFVWNTGFVLWTLFLCIVFRFAITYIM
SIIINKVDVYRVRKIGYDEMFIMSYGGLRGAVCFSLVALLDEKYFPQRPLFHTTTLIVILFTVFLQGATIKPLVKLLHVR
RAQASDLSMYQELNEKNPVTRFESNLQGMRKLHVVNQLRNKRSSNMRLARMNTIRKMPERALSWSESDSDLCQLREASTS
QHGLKERAKTMDMTTIPNTLEGFTNRSIDTPVIEEEPEDIDPRESNPLLRNGATQDNCETAPHSEHCQLQRQDAVTENIP
LGQIGKTKSQ
Protein IDpfu_aug2.0_862.1_07960.t2
Definition-
>pfu_aug2.0_862.1_07960.t2
MQAYNKITQSGGSVDAVHIVLGFLKFFIVCLGGLLIGVLVGLLSAILTKYTHKVKVVEPVAIFGMAYLAFLIAELFEFSG
IICIIGCGLVQVAYAFHNITSKSKVAIKYFSKVLSTTSEIIIFLFLGLSVYKEPFVWNTGFVLWTLFLCIVFRFAITYIM
SIIINKVDVYRVRKIGYDEMFIMSYGGLRGAVCFSLVALLDEKYFPQRPLFHTTTLIVILFTVFLQGATIKPLVKLLHVR
RAQASDLSMYQELNEKRKLGKQGALDLVNRTVGCNSVFILFE
Protein IDpfu_aug2.0_862.1_07960.t3
Definition-
>pfu_aug2.0_862.1_07960.t3
MRKLHVVNQLRNKRSSNMRLARMNTIRKMPERALSWSESDSDLCQLREASTSQHGLKERAKTMDMTTIPNTLEGFTKKPK
KVNRSRSIDTPVIEEEPEDIDPRESNPLLRNGATQDNCETAPHSEHCQLQRQDAVTENIPLGQIGKTKSQ

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