Gene
| Gene Model ID | pfu_aug2.0_862.1_07962 |
|---|---|
| Locus | scaffold862.1 : 120911 ... 136095 : - |
| To GenomeBrowser | scaffold862.1:120911..136095 |
| Genes list of scaffold | scaffold862.1 |
| Synonym | pfu_aug1.0_20108.1_61969 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_862.1_07962.t1 | 11 | 1 | zf-H2C2_2 | 261 | 271 | 4.2e-11 | 42.5 | 0.073 | 220.0 | 2.4 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 1 | zf-C2H2 | 265 | 288 | 4.7e-16 | 58.0 | 0.0007 | 2.1 | 8.8 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 1 | zf-C2H2_4 | 265 | 288 | 1.8e-10 | 40.4 | 0.02 | 60.0 | 4.3 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 1 | zf-C2H2_jaz | 265 | 276 | 7.0e-09 | 35.5 | 0.012 | 36.0 | 4.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 2 | zf-H2C2_2 | 283 | 302 | 4.2e-11 | 42.5 | 0.0023 | 6.7 | 7.2 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 2 | zf-C2H2 | 294 | 312 | 4.7e-16 | 58.0 | 0.036 | 110.0 | 3.4 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 2 | zf-C2H2_4 | 294 | 314 | 1.8e-10 | 40.4 | 0.042 | 120.0 | 3.3 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 2 | zf-C2H2_jaz | 294 | 312 | 7.0e-09 | 35.5 | 2.9e-05 | 0.086 | 13.0 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 3 | zf-H2C2_2 | 318 | 335 | 4.2e-11 | 42.5 | 0.0035 | 10.0 | 6.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 3 | zf-C2H2 | 326 | 348 | 4.7e-16 | 58.0 | 0.0017 | 5.1 | 7.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 3 | zf-C2H2_4 | 326 | 348 | 1.8e-10 | 40.4 | 0.0012 | 3.7 | 8.1 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 4 | zf-H2C2_2 | 341 | 367 | 4.2e-11 | 42.5 | 0.0067 | 20.0 | 5.7 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 4 | zf-C2H2 | 357 | 379 | 4.7e-16 | 58.0 | 5.6e-05 | 0.17 | 12.3 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 4 | zf-C2H2_4 | 358 | 377 | 1.8e-10 | 40.4 | 0.0019 | 5.6 | 7.5 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 3 | zf-C2H2_jaz | 358 | 376 | 7.0e-09 | 35.5 | 0.0066 | 20.0 | 5.5 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 5 | zf-H2C2_2 | 371 | 397 | 4.2e-11 | 42.5 | 1.7e-05 | 0.051 | 13.8 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 5 | zf-C2H2 | 387 | 406 | 4.7e-16 | 58.0 | 0.023 | 68.0 | 4.1 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 5 | zf-C2H2_4 | 387 | 408 | 1.8e-10 | 40.4 | 0.00013 | 0.4 | 11.1 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 4 | zf-C2H2_jaz | 387 | 404 | 7.0e-09 | 35.5 | 5.0e-05 | 0.15 | 12.2 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 6 | zf-H2C2_2 | 403 | 423 | 4.2e-11 | 42.5 | 0.013 | 40.0 | 4.7 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 6 | zf-C2H2 | 413 | 431 | 4.7e-16 | 58.0 | 4.0e-06 | 0.012 | 15.9 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 6 | zf-C2H2_4 | 413 | 431 | 1.8e-10 | 40.4 | 0.0008 | 2.4 | 8.7 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 5 | zf-C2H2_jaz | 417 | 421 | 7.0e-09 | 35.5 | 1.7 | 5000.0 | -2.2 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 7 | zf-H2C2_2 | 442 | 453 | 4.2e-11 | 42.5 | 0.0012 | 3.6 | 8.0 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 7 | zf-C2H2 | 444 | 465 | 4.7e-16 | 58.0 | 5.8e-05 | 0.17 | 12.2 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 7 | zf-C2H2_4 | 444 | 465 | 1.8e-10 | 40.4 | 8.9e-05 | 0.26 | 11.6 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 6 | zf-C2H2_jaz | 444 | 462 | 7.0e-09 | 35.5 | 9.0e-06 | 0.027 | 14.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 8 | zf-H2C2_2 | 459 | 482 | 4.2e-11 | 42.5 | 0.00073 | 2.2 | 8.7 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 7 | zf-C2H2_jaz | 473 | 496 | 7.0e-09 | 35.5 | 2.4e-07 | 0.0007 | 19.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 8 | zf-C2H2 | 474 | 496 | 4.7e-16 | 58.0 | 0.00048 | 1.4 | 9.3 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 8 | zf-C2H2_4 | 474 | 496 | 1.8e-10 | 40.4 | 0.00021 | 0.62 | 10.5 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 9 | zf-H2C2_2 | 489 | 514 | 4.2e-11 | 42.5 | 3.7e-06 | 0.011 | 16.0 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 9 | zf-C2H2 | 504 | 527 | 4.7e-16 | 58.0 | 2.4e-06 | 0.0073 | 16.5 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 9 | zf-C2H2_4 | 504 | 527 | 1.8e-10 | 40.4 | 0.0016 | 4.7 | 7.7 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 8 | zf-C2H2_jaz | 504 | 525 | 7.0e-09 | 35.5 | 0.12 | 360.0 | 1.4 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 10 | zf-H2C2_2 | 518 | 544 | 4.2e-11 | 42.5 | 4.4e-05 | 0.13 | 12.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 10 | zf-C2H2 | 533 | 548 | 4.7e-16 | 58.0 | 0.0017 | 5.0 | 7.6 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 9 | zf-C2H2_jaz | 533 | 542 | 7.0e-09 | 35.5 | 0.11 | 310.0 | 1.6 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 10 | zf-C2H2_4 | 534 | 548 | 1.8e-10 | 40.4 | 0.035 | 100.0 | 3.5 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 11 | zf-C2H2_4 | 563 | 582 | 1.8e-10 | 40.4 | 0.0016 | 4.8 | 7.7 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 11 | zf-C2H2 | 564 | 582 | 4.7e-16 | 58.0 | 0.00066 | 2.0 | 8.9 |
| pfu_aug2.0_862.1_07962.t1 | 11 | 11 | zf-H2C2_2 | 564 | 570 | 4.2e-11 | 42.5 | 1.1 | 3300.0 | -1.3 |
| pfu_aug2.0_862.1_07962.t1 | 10 | 10 | zf-C2H2_jaz | 564 | 578 | 7.0e-09 | 35.5 | 0.79 | 2300.0 | -1.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_862.1_07962.t1 | gi|675637028|ref|XP_008991310.1| | PREDICTED: zinc finger protein 782 isoform X1 [Callithrix jacchus] | 2.0e-31 |
| pfu_aug2.0_862.1_07962.t1 | gi|675637031|ref|XP_008991322.1| | PREDICTED: zinc finger protein 782 isoform X2 [Callithrix jacchus] | 2.0e-31 |
| pfu_aug2.0_862.1_07962.t1 | gi|189083704|ref|NP_001121107.1| | zinc finger protein 25 [Rattus norvegicus] | 4.0e-31 |
| pfu_aug2.0_862.1_07962.t1 | gi|634897280|ref|XP_007956650.1| | PREDICTED: zinc finger protein 345-like, partial [Orycteropus afer afer] | 3.0e-30 |
| pfu_aug2.0_862.1_07962.t1 | gi|589960989|ref|XP_006993068.1| | PREDICTED: zinc finger protein 58-like [Peromyscus maniculatus bairdii] | 4.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_862.1_07962.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07962.t1 atggaacttcaagaaatagtcacaaaaatcgctgaactgtgttgtggcttaccaagtcagacagaatggctgtttcttac atcagaggtttctgttatagcgggatcttactatggagggatatacatcacagatcatccagacatacagacagacttca tcaaattctgtgcatcaagatctatatctgctgaggaggaagatagaaagacaattctggaaagccaagagaactattgg actgaagaggacaaaccgacagatttgagctccgatatcaatgatgggatagacctgccagaaaaagtatacagtaactt tcaaggaactgaattcaggtcagaggaaatcgacagtaactttcaaggaaatgaattcagaccagaggaaatcgacgtaa aacctgatatctcatcagaaaacaggcatgatattttcccaatggaaagtaattcgtcaaaactagtttgtaatgattta tatcaaaataaaccaaaatcatcaaagaaaaaaagaaaagcaaaaacagagaagaaaaagaagggaaagaagaattgtaa gtctggagaaagtactgttccgaaaataaacatattattaagtgattcgtcagatgacactaaaaggcaagagaagttag aagagaatttatgccctcctagtagacagaccttaatgagatggtctcgtggcggaaagcaagccacactagcacagcaa ctagctgcccaaaacaggcaatataatagcagaatgaaagaaccaaaagtagacaaagatggtaatagatactatgagtg tgagatctgtggaatacactacatcagctataaagagacaatcgcccattacagaaaggatcacatgttaagtaggtcat tcccttgtaaggaatgtgataaagttctccacaccaggaatgtctggctgtatcacactgaaaacaaacacagcaatcat tcccagagaaatttgtttcactgtgaaaaatgcctgtcttcatttttctattccagccgtttgaaggttcatcaaaaaaa ttgtaaggggtctggcattgaggttattacgtgtaatttatgtggagatatgtttgttcatgacgtattacttcaaaacc atatcaagctgacgcattctgggattgatgccaaaatcaaatgccgacactgtgatctttggtttaaatctgaggaggaa atgacgaaacatgcggaagatcatcaaagttcttcataccaatgtcggtattgtaaagaatgcttttcatctaatgatga attgatacaacatggaaactgtcttaataagatcaaatctttacctctaaaatgtgaattatgcggtaagaatttcaaga agttcaaattctacagaagtcacatgttactacatgtcaaaactaacacaaaagcaaagtttgaatgtgaaatatgtaat aaagaatgcatcagtgaaaaaggctacagacgtcacaaactcagccatttacctaatgcagaaaaaccttttcattgtga agaatgtgggcaaggatttgttgttcagacagacctgaaatttcacatcaagacgttccatgatcgtaagagtgacttca tgtgtgagatttgtggtcgggcatataactacagccgttctttgactggctctcaatcagcctattgggactggtacatg catggatgtgtgtgtggcaagtcttttgcacaagcacgtggtttgcgaatccaccaaggaaaatgtgctgtgcacatcca gggggagagcattaaagatgtcgacatatcaacccggaatgtaaaccaggagtcactgaacagtaatgtgaggaataatg aggaagtgtcctccatggctgtattgactgaggaacttcctcaagctttatcatacataaaacatgtgacttaa |
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Protein
| Protein ID | pfu_aug2.0_862.1_07962.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07962.t1 MELQEIVTKIAELCCGLPSQTEWLFLTSEVSVIAGSYYGGIYITDHPDIQTDFIKFCASRSISAEEEDRKTILESQENYW TEEDKPTDLSSDINDGIDLPEKVYSNFQGTEFRSEEIDSNFQGNEFRPEEIDVKPDISSENRHDIFPMESNSSKLVCNDL YQNKPKSSKKKRKAKTEKKKKGKKNCKSGESTVPKINILLSDSSDDTKRQEKLEENLCPPSRQTLMRWSRGGKQATLAQQ LAAQNRQYNSRMKEPKVDKDGNRYYECEICGIHYISYKETIAHYRKDHMLSRSFPCKECDKVLHTRNVWLYHTENKHSNH SQRNLFHCEKCLSSFFYSSRLKVHQKNCKGSGIEVITCNLCGDMFVHDVLLQNHIKLTHSGIDAKIKCRHCDLWFKSEEE MTKHAEDHQSSSYQCRYCKECFSSNDELIQHGNCLNKIKSLPLKCELCGKNFKKFKFYRSHMLLHVKTNTKAKFECEICN KECISEKGYRRHKLSHLPNAEKPFHCEECGQGFVVQTDLKFHIKTFHDRKSDFMCEICGRAYNYSRSLTGSQSAYWDWYM HGCVCGKSFAQARGLRIHQGKCAVHIQGESIKDVDISTRNVNQESLNSNVRNNEEVSSMAVLTEELPQALSYIKHVT |
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