Gene
| Gene Model ID | pfu_aug2.0_862.1_07963 |
|---|---|
| Locus | scaffold862.1 : 143800 ... 155555 : - |
| To GenomeBrowser | scaffold862.1:143800..155555 |
| Genes list of scaffold | scaffold862.1 |
| Synonym | pfu_aug1.0_26930.1_11814 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_862.1_07963.t1 | 7 | 1 | zf-H2C2_2 | 156 | 170 | 3.0e-22 | 77.7 | 0.015 | 25.0 | 5.3 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 1 | zf-C2H2_4 | 161 | 183 | 3.8e-21 | 73.8 | 1.7e-07 | 0.00027 | 21.0 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 1 | zf-C2H2 | 161 | 183 | 9.2e-20 | 69.7 | 1.7e-07 | 0.00028 | 21.0 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 1 | zf-C2H2_jaz | 161 | 180 | 7.3e-13 | 48.2 | 7.7e-06 | 0.013 | 15.6 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 1 | zf-C2H2_6 | 161 | 181 | 6.2e-06 | 25.9 | 4.7e-05 | 0.077 | 12.9 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 1 | zf-met | 162 | 180 | 1.5e-11 | 44.0 | 0.00046 | 0.76 | 10.0 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 2 | zf-H2C2_2 | 174 | 200 | 3.0e-22 | 77.7 | 1.3e-11 | 2.2e-08 | 33.9 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 2 | zf-C2H2_6 | 188 | 212 | 6.2e-06 | 25.9 | 7.3e-05 | 0.12 | 12.3 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 2 | zf-C2H2_4 | 189 | 209 | 3.8e-21 | 73.8 | 0.041 | 67.0 | 4.1 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 2 | zf-C2H2 | 189 | 212 | 9.2e-20 | 69.7 | 0.0092 | 15.0 | 6.1 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 2 | zf-C2H2_jaz | 189 | 209 | 7.3e-13 | 48.2 | 0.031 | 51.0 | 4.1 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 2 | zf-met | 189 | 207 | 1.5e-11 | 44.0 | 0.0013 | 2.1 | 8.6 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 3 | zf-H2C2_2 | 206 | 225 | 3.0e-22 | 77.7 | 1.2 | 1900.0 | -0.6 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 3 | zf-C2H2_4 | 218 | 239 | 3.8e-21 | 73.8 | 6.5e-07 | 0.0011 | 19.1 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 3 | zf-C2H2_6 | 218 | 239 | 6.2e-06 | 25.9 | 0.0034 | 5.5 | 7.0 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 3 | zf-C2H2 | 219 | 239 | 9.2e-20 | 69.7 | 7.4e-05 | 0.12 | 12.7 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 3 | zf-C2H2_jaz | 219 | 237 | 7.3e-13 | 48.2 | 0.00034 | 0.56 | 10.4 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 3 | zf-met | 219 | 236 | 1.5e-11 | 44.0 | 2.4e-05 | 0.04 | 14.1 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 4 | zf-H2C2_2 | 231 | 255 | 3.0e-22 | 77.7 | 0.00035 | 0.57 | 10.5 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 4 | zf-C2H2_4 | 249 | 271 | 3.8e-21 | 73.8 | 0.00063 | 1.0 | 9.8 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 4 | zf-C2H2 | 249 | 271 | 9.2e-20 | 69.7 | 0.0025 | 4.1 | 7.9 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 4 | zf-met | 249 | 267 | 1.5e-11 | 44.0 | 1.2e-05 | 0.02 | 15.0 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 4 | zf-C2H2_jaz | 250 | 269 | 7.3e-13 | 48.2 | 0.00038 | 0.62 | 10.2 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 4 | zf-C2H2_6 | 250 | 266 | 6.2e-06 | 25.9 | 0.74 | 1200.0 | -0.5 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 5 | zf-H2C2_2 | 263 | 295 | 3.0e-22 | 77.7 | 0.00088 | 1.4 | 9.3 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 5 | zf-C2H2_4 | 286 | 307 | 3.8e-21 | 73.8 | 2.4e-07 | 0.0004 | 20.5 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 5 | zf-C2H2 | 286 | 307 | 9.2e-20 | 69.7 | 1.6e-06 | 0.0026 | 17.9 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 5 | zf-met | 286 | 305 | 1.5e-11 | 44.0 | 0.026 | 43.0 | 4.4 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 5 | zf-C2H2_6 | 286 | 295 | 6.2e-06 | 25.9 | 0.049 | 80.0 | 3.3 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 5 | zf-C2H2_jaz | 287 | 303 | 7.3e-13 | 48.2 | 0.0061 | 10.0 | 6.4 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 6 | zf-H2C2_2 | 300 | 323 | 3.0e-22 | 77.7 | 3.7e-12 | 6.1e-09 | 35.7 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 6 | zf-C2H2_6 | 312 | 335 | 6.2e-06 | 25.9 | 0.00027 | 0.45 | 10.4 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 6 | zf-C2H2_4 | 313 | 335 | 3.8e-21 | 73.8 | 6.1e-06 | 0.01 | 16.1 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 6 | zf-C2H2 | 313 | 335 | 9.2e-20 | 69.7 | 1.2e-06 | 0.0019 | 18.3 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 6 | zf-C2H2_jaz | 313 | 335 | 7.3e-13 | 48.2 | 1.5e-05 | 0.024 | 14.7 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 6 | zf-met | 314 | 335 | 1.5e-11 | 44.0 | 0.00058 | 0.96 | 9.7 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 7 | zf-H2C2_2 | 327 | 350 | 3.0e-22 | 77.7 | 0.00015 | 0.24 | 11.7 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 7 | zf-C2H2_4 | 343 | 362 | 3.8e-21 | 73.8 | 0.0024 | 3.9 | 8.0 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 7 | zf-C2H2 | 344 | 362 | 9.2e-20 | 69.7 | 0.00019 | 0.31 | 11.4 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 7 | zf-C2H2_jaz | 344 | 361 | 7.3e-13 | 48.2 | 0.5 | 820.0 | 0.3 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 7 | zf-met | 344 | 359 | 1.5e-11 | 44.0 | 2.0 | 3200.0 | -1.5 |
| pfu_aug2.0_862.1_07963.t1 | 7 | 7 | zf-C2H2_6 | 344 | 349 | 6.2e-06 | 25.9 | 0.94 | 1600.0 | -0.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_862.1_07963.t1 | gi|637356119|ref|XP_008119263.1| | PREDICTED: zinc finger protein 239-like [Anolis carolinensis] | 4.0e-32 |
| pfu_aug2.0_862.1_07963.t1 | gi|548447117|ref|XP_005746409.1| | PREDICTED: zinc finger protein 333-like isoform X1 [Pundamilia nyererei] | 7.0e-31 |
| pfu_aug2.0_862.1_07963.t1 | gi|637379006|ref|XP_008123434.1| | PREDICTED: zinc finger protein 135-like [Anolis carolinensis] | 1.0e-30 |
| pfu_aug2.0_862.1_07963.t1 | gi|499037794|ref|XP_004569543.1| | 2.0e-30 | |
| pfu_aug2.0_862.1_07963.t1 | gi|625222914|ref|XP_007651209.1| | PREDICTED: zinc finger protein OZF-like isoform X1 [Cricetulus griseus] | 3.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_862.1_07963.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07963.t1 atggagggaggtgagagtacatcaaggattaatgacatgacattactaaaggataaacacatattcttgtctgaaccgcc gcttaaggaatcaaataaaaagactaaagatgacgtgaaacataaaaaacgtggtccgaaaaagaaaggaactgtgaaag aaaaatccactcagaaagataaacatgtggatggtgaaaaaacaaaaaatgaatccaagagaaagtataataagaaaact aaacaggtcaacaaaaattgtgaaattacaaatgggaatgaagataactgtatccatgacgctttaaagaaagaggaaga aaatgaaatgatcatgaatgatgatgtgcagaaggaggatagcaaagacgaaaaaatcacattgacggtgggaggggccg tacctgatgcacctccagttaagatcaggaagaagtatacgtgtaagaaggaaaagaaaaagtcagtaaaagaaatttcc gtatgtgatttttgtggcagaacctttaattcatccagatcactccaatatcacatcaggagagagcacacaggagaaaa accatacaaatgtgaagtttgtcaagaaacgttttactccagcagaaccatgtattatcacaagaaacatacccataatc ctgtggacagtatctgtgagatctgtggacttaaatacccctcagaggaagctttaaagagtcatatttaccaacataaa atgaaattaaaaaggaaggaggtccagtgtgaactctgcaagaaaatactgccatctcagaagagctacttaagacattt tgcacggaatcatttgaatagcagtaacacaagctcctttcctataaatgttgtgaagtgtgaagaatgtgggaagatct ttactgataactggagattgaggaaccatgttcgtgtccacacaggagagaaaccccataaatgtagtcattgtggtaaa ggctttgctgataggggtaatatgagggtacatgaaaggtctcacacagacacagaaaggcatgaatgtgtgtgtggcaa gtcttttgtacaagcacgcagtatgagaatccaccaaaggacatgtgccgtgtacatccagggggagagcatgaaggacg gtgatgtatctactcagaatgagagtaaggatacccagaacagtgatgtgaggaatactgaggcagtgtcctcttttacc ttggaacttcctcaagctgtatcctacataacacatggtgtagtgatagactacagtgcagctcaccatcaaaactggac tgtctgccaactggacaatacaaagcagctactgcagtgtgcggaggaggtgcaaatccaatttaaggaggagcaacttg agtgtaacaaccagcaacttgagtgtaacaatgagcaacttgagtgtaacaaccagcaacttgagtgtaccaatgagcaa ctacaatgtacataa |
|
Protein
| Protein ID | pfu_aug2.0_862.1_07963.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07963.t1 MEGGESTSRINDMTLLKDKHIFLSEPPLKESNKKTKDDVKHKKRGPKKKGTVKEKSTQKDKHVDGEKTKNESKRKYNKKT KQVNKNCEITNGNEDNCIHDALKKEEENEMIMNDDVQKEDSKDEKITLTVGGAVPDAPPVKIRKKYTCKKEKKKSVKEIS VCDFCGRTFNSSRSLQYHIRREHTGEKPYKCEVCQETFYSSRTMYYHKKHTHNPVDSICEICGLKYPSEEALKSHIYQHK MKLKRKEVQCELCKKILPSQKSYLRHFARNHLNSSNTSSFPINVVKCEECGKIFTDNWRLRNHVRVHTGEKPHKCSHCGK GFADRGNMRVHERSHTDTERHECVCGKSFVQARSMRIHQRTCAVYIQGESMKDGDVSTQNESKDTQNSDVRNTEAVSSFT LELPQAVSYITHGVVIDYSAAHHQNWTVCQLDNTKQLLQCAEEVQIQFKEEQLECNNQQLECNNEQLECNNQQLECTNEQ LQCT |
|