Gene
| Gene Model ID | pfu_aug2.0_862.1_07964 |
|---|---|
| Locus | scaffold862.1 : 159380 ... 182948 : + |
| To GenomeBrowser | scaffold862.1:159380..182948 |
| Genes list of scaffold | scaffold862.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_862.1_07964.t1 | 3 | 1 | BIR | 22 | 87 | 4.5e-39 | 132.6 | 2.6e-20 | 6.4e-17 | 61.7 |
| pfu_aug2.0_862.1_07964.t1 | 3 | 1 | zf-C3HC4_3 | 57 | 61 | 1.5e-12 | 46.9 | 1.1 | 2700.0 | -1.9 |
| pfu_aug2.0_862.1_07964.t1 | 3 | 2 | BIR | 154 | 219 | 4.5e-39 | 132.6 | 6.3e-26 | 1.6e-22 | 79.7 |
| pfu_aug2.0_862.1_07964.t1 | 3 | 2 | zf-C3HC4_3 | 187 | 191 | 1.5e-12 | 46.9 | 2.5 | 6100.0 | -3.1 |
| pfu_aug2.0_862.1_07964.t1 | 3 | 3 | zf-C3HC4_3 | 327 | 369 | 1.5e-12 | 46.9 | 6.0e-16 | 1.5e-12 | 46.9 |
| pfu_aug2.0_862.1_07964.t1 | 3 | 3 | BIR | 335 | 359 | 4.5e-39 | 132.6 | 3.9 | 9600.0 | -2.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_862.1_07964.t1 | gi|676456898|ref|XP_009054472.1| | hypothetical protein LOTGIDRAFT_203896 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_862.1_07964.t1 | gi|742117400|ref|XP_010874146.1| | PREDICTED: baculoviral IAP repeat-containing protein 7 isoform X2 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_862.1_07964.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07964.t1 atggacattgttccacaaagcccatatgagaggttagagcccttaaggaatagctggcagaaacgttatggtactttcca aggcaaatggccatctcatgctcctgtaacggcaaaagatttggccgatgattatttttattatattggttacgaggaca aagttcagtgtacccactgtggtgggattctgagtggttggtgtatgggggatgtggtgacggtggaacatgccaaacat ttcccacattgtccctgggtggcagagcagcagcgtagagcccaccaacaacaactgtctcctaacttagccgacagtca agtaccacgcagtgacggaaggtctggctttaactttgcattccatggtgacaacttgcgttatcagcaaacatataaca gtcatgatatgccgggaaggaatagagctaaattccaggagtatgcggtggaatcgacacggctctctacatacaggggc tggccatcacagatgaaacaaacaccagagatacttacaaaatcaggctttttctatctaggtgaaggagacaaggtgaa gtgtttttactgtggtggtatcctgtgggactgggaggagggggacgatccctgggaggaacatgccaagtggttcccag actgcccctggctcaaaatggcaaagggagacaactacattaaccgcattcaacaggatttgaatagaatgcagatagat gattctgaggataatcagcaaacttcagcaaaagtaggagccagtgaagctacaagtgtgaaaactgtggatagtaatga atcagcctccacatctcgtgtttgtcagccatctgatgctaagagtacaccaactgcccctaaatctccaaaaagtccca gtaacgcggcaggtatcacctctataggagccctgacagacaaggagaaagtcgatgttgtagctttggtaagggagaat gagaatctaaagagcacgacatcgtgtaaggtttgcctggacgctgacgttggtgtcgtatttttaccctgcggacatat ctgctgctgtgccagttgtgcagccccgctacaacaatgtccgatttgccggaaaacgattgacaaggctgtcaaagcat tcttatcataa |
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Protein
| Protein ID | pfu_aug2.0_862.1_07964.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07964.t1 MDIVPQSPYERLEPLRNSWQKRYGTFQGKWPSHAPVTAKDLADDYFYYIGYEDKVQCTHCGGILSGWCMGDVVTVEHAKH FPHCPWVAEQQRRAHQQQLSPNLADSQVPRSDGRSGFNFAFHGDNLRYQQTYNSHDMPGRNRAKFQEYAVESTRLSTYRG WPSQMKQTPEILTKSGFFYLGEGDKVKCFYCGGILWDWEEGDDPWEEHAKWFPDCPWLKMAKGDNYINRIQQDLNRMQID DSEDNQQTSAKVGASEATSVKTVDSNESASTSRVCQPSDAKSTPTAPKSPKSPSNAAGITSIGALTDKEKVDVVALVREN ENLKSTTSCKVCLDADVGVVFLPCGHICCCASCAAPLQQCPICRKTIDKAVKAFLS |
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