Gene
| Gene Model ID | pfu_aug2.0_862.1_07968 |
|---|---|
| Locus | scaffold862.1 : 219715 ... 225390 : - |
| To GenomeBrowser | scaffold862.1:219715..225390 |
| Genes list of scaffold | scaffold862.1 |
| Synonym | pfu_aug1.0_20419.1_33099 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein dpcd | GO:0006928 GO:0007389 GO:0021591 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_862.1_07968.t1 | 1 | 1 | DPCD | 1 | 147 | 0.0 | 206.1 | 0.0 | 0.0 | 205.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_862.1_07968.t1 | gi|156382143|ref|XP_001632414.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_862.1_07968.t1 | gi|524865314|ref|XP_005089487.1| | PREDICTED: protein DPCD-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_862.1_07968.t1 | gi|524865316|ref|XP_005089488.1| | PREDICTED: protein DPCD-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_862.1_07968.t1 | gi|260827901|ref|XP_002608902.1| | hypothetical protein BRAFLDRAFT_114904 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_862.1_07968.t1 | gi|557002310|ref|XP_006003510.1| | PREDICTED: protein DPCD [Latimeria chalumnae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_862.1_07968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07968.t1 gtagaagaaaaattcatttcacttttcctgatgggacagagatggctgaagaatatgatgtgaaaacaaatgaaatttta gtgaggaaatggagaaaaaaggcaacaataggaatgaaagaatccaaatgggagtatgagattggtgaacaattcgctcc aagaaatctggatgctgaagggctaatggagagcacaagtaatcctatctttgcaagaaaagacacaagcctagcattcc agtggagggttaggaaccttccatatcccatagaaacctacgatgtaacgctcaacaatgatatgagacaagtcactgta cgcacaactaataaaaagtactacaagaaatttgacataccagatatggatagagctcagctacctctggaaccagcaaa tttgtctatagcttacggaaataacactcttattattactctacatgctcatagagtaacataa |
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Protein
| Protein ID | pfu_aug2.0_862.1_07968.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_862.1_07968.t1 RRKIHFTFPDGTEMAEEYDVKTNEILVRKWRKKATIGMKESKWEYEIGEQFAPRNLDAEGLMESTSNPIFARKDTSLAFQ WRVRNLPYPIETYDVTLNNDMRQVTVRTTNKKYYKKFDIPDMDRAQLPLEPANLSIAYGNNTLIITLHAHRVT |
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