Gene
| Gene Model ID | pfu_aug2.0_863.1_11253 |
|---|---|
| Locus | scaffold863.1 : 113147 ... 115085 : - |
| To GenomeBrowser | scaffold863.1:113147..115085 |
| Genes list of scaffold | scaffold863.1 |
| Synonym | pfu_aug1.0_3.1_00041 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_863.1_11253.t1 | 2 | 1 | Tyrosinase | 68 | 121 | 3.2e-17 | 63.4 | 7.9e-21 | 5.8e-17 | 62.5 |
| pfu_aug2.0_863.1_11253.t1 | 2 | 2 | Tyrosinase | 168 | 190 | 3.2e-17 | 63.4 | 0.77 | 5700.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_863.1_11253.t1 | gi|339259206|ref|XP_003369789.1| | putative PAN domain protein [Trichinella spiralis] | 2.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_863.1_11253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_863.1_11253.t1 atggaggacgctacaatctcgattctttggacaccaagctttttcgggaatgcttttaacgaagtagagcgaggtccatt tggtcactggacgacgcccgatggtcaaagactgcgaagaaacataggtttcctgggttcacttatacgtagatcggata tagaagggatgatagtaaatgcaagaaaccattcggacgtcgtgcgatccggatttgattctgtcacattttctgagtcg actatagaagctgaacatgataatgtccatgcatgggtaggagggacaatgagtggtttattaactgcagcatttgaccc attattctttcttcaccattgtttcatagatttaatttgggaaaaattgcgtgagggtttgcgccaaaagaacgtggatc cggaatccgactatcctgacacgataggtgaccaagcggcgggtagtcctatgtacttatttgactttcttagaaatatt gacggctattctgatagatggactaggcaattttaccaatacgacaatcagccaagttgttctggaggaacccaaggatg ttcgtcagaatatttaagatgtgccccaactagatctcagccagaaaatgttatgtgtacttccttgacctctaactacg tgctggatgtttcaccaagagtccgctacaaatctgcaatccttgatatcgagactacggttggtccaagattcacgagt tccacaaataagcatgttgctggtctttttaaacttatttcacctacttcacctctttcaagatctgagatcagtaaact ggcattttcgattctgaaaacgccgaatatatttaattccatatctgaaaaaatgaaacaacaactcatcatacgaatgt tttcgatgggtctataa |
|
Protein
| Protein ID | pfu_aug2.0_863.1_11253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_863.1_11253.t1 MEDATISILWTPSFFGNAFNEVERGPFGHWTTPDGQRLRRNIGFLGSLIRRSDIEGMIVNARNHSDVVRSGFDSVTFSES TIEAEHDNVHAWVGGTMSGLLTAAFDPLFFLHHCFIDLIWEKLREGLRQKNVDPESDYPDTIGDQAAGSPMYLFDFLRNI DGYSDRWTRQFYQYDNQPSCSGGTQGCSSEYLRCAPTRSQPENVMCTSLTSNYVLDVSPRVRYKSAILDIETTVGPRFTS STNKHVAGLFKLISPTSPLSRSEISKLAFSILKTPNIFNSISEKMKQQLIIRMFSMGL |
|