Gene
| Gene Model ID | pfu_aug2.0_866.1_21230 |
|---|---|
| Locus | scaffold866.1 : 217253 ... 218336 : + |
| To GenomeBrowser | scaffold866.1:217253..218336 |
| Genes list of scaffold | scaffold866.1 |
| Synonym | pfu_aug1.0_2786.1_37393 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_866.1_21230.t1 | 1 | 1 | EF-hand_7 | 53 | 115 | 1.2e-08 | 35.0 | 4.6e-12 | 1.4e-08 | 34.7 |
| pfu_aug2.0_866.1_21230.t1 | 2 | 1 | EF-hand_6 | 53 | 76 | 1.4e-08 | 33.9 | 4.4e-05 | 0.13 | 12.1 |
| pfu_aug2.0_866.1_21230.t1 | 2 | 1 | EF-hand_5 | 62 | 73 | 5.5e-08 | 31.8 | 0.00024 | 0.71 | 9.3 |
| pfu_aug2.0_866.1_21230.t1 | 2 | 1 | EF-hand_1 | 62 | 77 | 6.2e-07 | 28.2 | 0.0022 | 6.5 | 6.3 |
| pfu_aug2.0_866.1_21230.t1 | 2 | 2 | EF-hand_6 | 94 | 114 | 1.4e-08 | 33.9 | 2.0e-07 | 0.00061 | 19.4 |
| pfu_aug2.0_866.1_21230.t1 | 2 | 2 | EF-hand_1 | 94 | 115 | 6.2e-07 | 28.2 | 9.2e-08 | 0.00027 | 20.0 |
| pfu_aug2.0_866.1_21230.t1 | 2 | 2 | EF-hand_5 | 95 | 115 | 5.5e-08 | 31.8 | 7.8e-08 | 0.00023 | 20.3 |
Transcript
| Transcript ID | pfu_aug2.0_866.1_21230.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_866.1_21230.t1 atgtcgttgacaaagctgattttgattgtattggtcataatgtccactattttacaaactgaaggggatgtttgtctcgg tgtaaatattggctggggaagaaaacgttcacttgccggaaagttcaaaatcaccatgcagctaaatccatgtcagttct cgtcatatgatctggttaaccctgacggcaagctcaccagaaacgaactggaaaaattatttgagaaaatgggcatagca aaaacagatccggtcaacaagaaaatggattttttcgctcataaggttttccaagcattgaataaaaatggagatggaga aataacaccagaagagttcaaggaaaaagccccttctgtgataactggatgctaa |
|
Protein
| Protein ID | pfu_aug2.0_866.1_21230.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_866.1_21230.t1 MSLTKLILIVLVIMSTILQTEGDVCLGVNIGWGRKRSLAGKFKITMQLNPCQFSSYDLVNPDGKLTRNELEKLFEKMGIA KTDPVNKKMDFFAHKVFQALNKNGDGEITPEEFKEKAPSVITGC |
|