Gene
| Gene Model ID | pfu_aug2.0_868.1_27858 |
|---|---|
| Locus | scaffold868.1 : 27319 ... 42775 : - |
| To GenomeBrowser | scaffold868.1:27319..42775 |
| Genes list of scaffold | scaffold868.1 |
| Synonym | pfu_aug1.0_7519.1_52987 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_868.1_27858.t1 | 1 | 1 | Helitron_like_N | 331 | 385 | 3.5e-14 | 52.9 | 6.3e-17 | 1.0e-13 | 51.4 |
| pfu_aug2.0_868.1_27858.t1 | 1 | 1 | PIF1 | 914 | 1251 | 1.4e-29 | 103.1 | 1.5e-30 | 2.5e-27 | 95.8 |
| pfu_aug2.0_868.1_27858.t1 | 1 | 1 | AAA_30 | 937 | 1144 | 2.8e-08 | 33.5 | 5.5e-11 | 9.1e-08 | 31.9 |
| pfu_aug2.0_868.1_27858.t1 | 2 | 1 | AAA_22 | 940 | 1063 | 8.1e-06 | 26.0 | 5.2e-08 | 8.6e-05 | 22.6 |
| pfu_aug2.0_868.1_27858.t1 | 2 | 2 | AAA_22 | 1179 | 1225 | 8.1e-06 | 26.0 | 1.0 | 1700.0 | -1.0 |
Transcript
| Transcript ID | pfu_aug2.0_868.1_27858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27858.t1 atgaaagaactacccaggggaggacaactaagtttaaaaggaaacgtggtcaatgtacctgcagatgttgcaaacactgt tcgtgttttacccaggaatatgaatgatacagagactatacctctaaaactaaagagaaatttgtgctacaagtcattta cagcatttcagaatgtaagaccgaaacgtgttattgagtggttagttaaaaatagtacattatttcagaatgaaggcatc attttggatgaatcgtggtctgctgaaaacagagattccggtagaattgatttagatagctctgtcaatcaagatatttc aaataataatcaaagcgaaaattatttgaataaaaatagaatagacatgtctttaaataccagtaatcttcaagctttta atgcaaatgatggtataggaatcgacgacaacaatgaagaagacaatgaaaatgtaggatcaggtaatatggataccatg atgcagcctgctgattatcgtgaatttaatagaattctgtccgttgcacctggagctggaaatactccattaagtatgtt ccaagataaatatgctgagttcctttcttttcccaacatttactgtgggcaagttagaactgataataataagagatata aacctttacattatagtaccatatgcaagtgggaacttcgaaaccatgatcgcagagtagcaaatgatgtgtcaaatatc tttttcaaattgaagaaattacaaataaaacagattgttgacaaggtctctctagctataagaaaatgtaaaacaaagaa taagaagtttacagttggtgaaatattgtcagatgttggagtgaataatatattgaaacatgatgagggatacaagcaga aacaaaatggttgcctctacttagatcccatttttcagtccaaacatgatcgaatttgtagtgatgaagaactcttggcc ctcacttggattgagaaaaatgaccttattaaatcagatcctgtcaaatgtgctagatactttgatagaagatttcaagt ttttttcactgatgtgttgaagcattcttcaaatcccataggtttgattaaagatttcttttatcgtgtcgagttccagc agcgaggatcaccacacattcatatgttattgtggattgagaattctccaagtaaaacatgcaatggtaacaaaagcaaa atcatagacttcgtggatcagtatgttacttgtaaaaacgatgatagtatcattgaattagttaattatcaaactcacag acatggtagaacttgtcgtcgcctatctagtaactgcaggttcggatttcctctccctcctatggaccagactatgattt tgcatggtttagatgaaaatttcaaggataggggtattcacgagtctaattacagaaaaattattgaaatattagagact ttcaaactgggacaagatgttgatttaagctttaaagactttttgagtaagctatgtcttagcaaggatgaatactttct ggcaattcgaagttgtcttcaaccaaatagagcaaagttatttctaaaaaggaaattatcagaaataagagtcaatagct acaatgcattgctgctcaaaacatggaaagcaaatatggatttgcaatacatactagatccttatgcctgtgcagcatac attgtttcatatgtttcaaaaggtcagaggggaatgtccaacttgttgagtaatgcatgcacagctgcaagagaacaaaa caatgacataagagaacaggttagacgagtaggcaatattttcttgaatcatgttgaagtgggagctcaagaagctgtct acataattttagggttaccccttaggagagcatcaagagatgttgtatttatcgataccaatttgcctgagaatagagta actctcttaaaatcaacctctgctttgcaagaattaccagcaacttcaacagatattgaaagtgataatcatataaaacg ttataaacgtcgcccaagaagtatgcagtcctgctgcctagttgattttgtttgctgttatgatgttaaatatgattcaa aatgctcattttcaaatcatactagtaaaaaaatgcccacttcagaaaatgaaataggtgagcttcctgaatgtgagtat gtcttagattacactgatgatccaacagatcaggaggaagtaaatgaagtagcatcaaatgatgttgagatgcattatgg aaaagatggatcaatcattaagaaaagacacaatgtcagagttttctactctatcggttataataaggagagtgagtcag aaaatcactacagagaaaaactaatgctctttctcccttggcgaaatgaatctgaaattcttggaaattatatgtcttac aaggacagatacttagacaacattgacaatatcgaaaaaaagcttgagatgtacagaacatcaataaatgttgacattga agaaatagcagaaaatttgcctaatgatactataaatgaaaatgtaactgacatggaacaatctgataaaagccctcaag attctgattgtcatacttcaacaattttcactgaatatggctgttttgaccctggaaaccaaatggctcatgaatatgac ttagctgatgacttgggtatacaacatcgtcaaaataatatcgacaatgatgtattggtacaggaaatggaagatgaatc atatcgagcattagtacaaaaactcaatcagaaacagagaacatttttttatctggtattaaattggttcaaaaccaaaa ccttaccaatatactcatttctaactggcggagcaggagtaggaaaaagtttagtcttaaaaacactttatcaagcttta ctcaaatattacagtcacaaagctggagaaaatccagagagtatcagagttcttgtatgtgcaccaaccggtaaggctgc ttataatgtaaacggtgctacaattcattctgcattttgcattcctgcaaatcaaggttttcagtacaagccgttggata tgcagcaattgaattctttgcaagtgaaatatatgcatttgaaagttgtttttatagatgaacatgatgaaatatcaatg gttggcagaagaatgtttaattatcttaacatgagactacaagaaataaagggaagtactgctccatttggtggtgtatc tgttgtagcatttggtgacttgtatcaactaaaacctgtcctggattcatggatattctcagattccaactctgaacacc tggactgtttagcttcaaatatatggaaagacaacttttctatatttgaattatgtgagataatgagacaaaaagatgac tttacatttgcagctctattaaatcgattaagagagggtaactatacaacttcagacattgaaactctgaaatccagagt gatagacactgaaaatgaaaatacatccaatttaccacatcttttcacaacaaggaaagaatcaactgactacaacaata aaatttttttgaatacaagatttgaaaaggatcaaataaagtcaattgattatgtgtctggaaatgtttcaaaggaatta catgataagattttatcaaaaattccaagtgatgcatccaaaacgaaagggttgctgtctttattgaatattgctgtagg cactccagcagaaatatgtttaaatgttgatgtttcagatggcttaacaaatggtacaccatgcataataaagttattag actacagagttactgattcaaatcgttgtagtattatatgggtggaatttgaagatgaaggggtcggcaaggcatgtaga gtaaagtacagtcatttaaaaacatccaatgtctcaattttgccaagttggactccgattttagaagtctcaaggtcatt tcccgtaagttactacaagtcatttcaagtaatcaggagacagtttcctctagttatggcagctgcaaaaactgtacaca aatcacaaggcagtacaatgacttctgctgttgtgcacatgggcaaacgtaaaactgaacacgtgcattatgttgcattg agtaggatggagacactatcaacattaaagaagggtaccggtacaagagtgcaaccctaccagaaaccactaagacttaa ggttgtagcagtgaaatcgtcaagggaatacaaaccaggcagcaaaatgttggccatggctctagctgataaaacagact tcattagaggagtctgttttgaagaagctaaattcaagtatttaacggagggagctggggatggagccgttactacagct gctattagagggaataatgtaaatgttaaaacaattgaagtttctgatggacgagacaaggttaaagcgttcgagccaga attagaggaagtgaccattgaaattgtgggttgtgatgtgggtgacatttctacagagctaatcacagctgattcagaaa tattcaccatcgacaacagcatcattaccatgataacagacatagaggaattccctacaacattacccaaaattatgagg gtgaaagttatgaagaacaaggtagaggcaattgttgaggactctgattga |
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Protein
| Protein ID | pfu_aug2.0_868.1_27858.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27858.t1 MKELPRGGQLSLKGNVVNVPADVANTVRVLPRNMNDTETIPLKLKRNLCYKSFTAFQNVRPKRVIEWLVKNSTLFQNEGI ILDESWSAENRDSGRIDLDSSVNQDISNNNQSENYLNKNRIDMSLNTSNLQAFNANDGIGIDDNNEEDNENVGSGNMDTM MQPADYREFNRILSVAPGAGNTPLSMFQDKYAEFLSFPNIYCGQVRTDNNKRYKPLHYSTICKWELRNHDRRVANDVSNI FFKLKKLQIKQIVDKVSLAIRKCKTKNKKFTVGEILSDVGVNNILKHDEGYKQKQNGCLYLDPIFQSKHDRICSDEELLA LTWIEKNDLIKSDPVKCARYFDRRFQVFFTDVLKHSSNPIGLIKDFFYRVEFQQRGSPHIHMLLWIENSPSKTCNGNKSK IIDFVDQYVTCKNDDSIIELVNYQTHRHGRTCRRLSSNCRFGFPLPPMDQTMILHGLDENFKDRGIHESNYRKIIEILET FKLGQDVDLSFKDFLSKLCLSKDEYFLAIRSCLQPNRAKLFLKRKLSEIRVNSYNALLLKTWKANMDLQYILDPYACAAY IVSYVSKGQRGMSNLLSNACTAAREQNNDIREQVRRVGNIFLNHVEVGAQEAVYIILGLPLRRASRDVVFIDTNLPENRV TLLKSTSALQELPATSTDIESDNHIKRYKRRPRSMQSCCLVDFVCCYDVKYDSKCSFSNHTSKKMPTSENEIGELPECEY VLDYTDDPTDQEEVNEVASNDVEMHYGKDGSIIKKRHNVRVFYSIGYNKESESENHYREKLMLFLPWRNESEILGNYMSY KDRYLDNIDNIEKKLEMYRTSINVDIEEIAENLPNDTINENVTDMEQSDKSPQDSDCHTSTIFTEYGCFDPGNQMAHEYD LADDLGIQHRQNNIDNDVLVQEMEDESYRALVQKLNQKQRTFFYLVLNWFKTKTLPIYSFLTGGAGVGKSLVLKTLYQAL LKYYSHKAGENPESIRVLVCAPTGKAAYNVNGATIHSAFCIPANQGFQYKPLDMQQLNSLQVKYMHLKVVFIDEHDEISM VGRRMFNYLNMRLQEIKGSTAPFGGVSVVAFGDLYQLKPVLDSWIFSDSNSEHLDCLASNIWKDNFSIFELCEIMRQKDD FTFAALLNRLREGNYTTSDIETLKSRVIDTENENTSNLPHLFTTRKESTDYNNKIFLNTRFEKDQIKSIDYVSGNVSKEL HDKILSKIPSDASKTKGLLSLLNIAVGTPAEICLNVDVSDGLTNGTPCIIKLLDYRVTDSNRCSIIWVEFEDEGVGKACR VKYSHLKTSNVSILPSWTPILEVSRSFPVSYYKSFQVIRRQFPLVMAAAKTVHKSQGSTMTSAVVHMGKRKTEHVHYVAL SRMETLSTLKKGTGTRVQPYQKPLRLKVVAVKSSREYKPGSKMLAMALADKTDFIRGVCFEEAKFKYLTEGAGDGAVTTA AIRGNNVNVKTIEVSDGRDKVKAFEPELEEVTIEIVGCDVGDISTELITADSEIFTIDNSIITMITDIEEFPTTLPKIMR VKVMKNKVEAIVEDSD |
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