Gene
| Gene Model ID | pfu_aug2.0_868.1_27860 |
|---|---|
| Locus | scaffold868.1 : 73202 ... 85635 : - |
| To GenomeBrowser | scaffold868.1:73202..85635 |
| Genes list of scaffold | scaffold868.1 |
| Synonym | pfu_aug1.0_17423.1_18460 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_868.1_27860.t1 | 2 | 1 | cNMP_binding | 9 | 63 | 6.1e-14 | 51.6 | 4.9e-06 | 0.073 | 12.8 |
| pfu_aug2.0_868.1_27860.t1 | 2 | 2 | cNMP_binding | 102 | 195 | 6.1e-14 | 51.6 | 2.3e-13 | 3.3e-09 | 36.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_868.1_27860.t1 | gi|198424694|ref|XP_002120029.1| | PREDICTED: cyclic nucleotide-binding domain-containing protein 1-like [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_868.1_27860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27860.t1 atggcgctcgttaagctagaaagtggacttcaaaagccagcatggagcttgaagcctggtgattgcttcggaacacttac aaaggttaaaagagaacagggttccagaatattcagtgtggagacaatagatcagaactgtgaatttctgaagatatcat cctcagattataccagagtcattgagcaaatcaagcataggaatcatacagagaaggtgaacctgttactatcatgtggg cagtatcagctgtggcccaaacaacctgttcttaaagtagcagacttaatagaatggatggctctaccacctaatacatt gatcgctagtgagggatacaaggccccctacatcggcttcataaagaagggagagtgtcatgtccttagacaagtagatg tcatgcatacactcagaaatggaagaagggaaaagagaacaaagcaggtagtgatgggaaaactgaaggattctgagtcg tttgccgaactgagtgtccttctggatgaaccaatcacatgtacaatattaacttcgagtaatgttgagctgggagtgat caagaaagatagaatcagagaattagacgatgacactaccaaactctttcaacaatcaaatgaacggacatttggcaatc taactaagaatgacatccaagaagagtatatgaaccaagaactgaagagagaatggaacgagttcaagcatggagtcatg atggaagtaataaattataaaggaattcgacctgggtacggaaaatgggcaaaataa |
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Protein
| Protein ID | pfu_aug2.0_868.1_27860.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27860.t1 MALVKLESGLQKPAWSLKPGDCFGTLTKVKREQGSRIFSVETIDQNCEFLKISSSDYTRVIEQIKHRNHTEKVNLLLSCG QYQLWPKQPVLKVADLIEWMALPPNTLIASEGYKAPYIGFIKKGECHVLRQVDVMHTLRNGRREKRTKQVVMGKLKDSES FAELSVLLDEPITCTILTSSNVELGVIKKDRIRELDDDTTKLFQQSNERTFGNLTKNDIQEEYMNQELKREWNEFKHGVM MEVINYKGIRPGYGKWAK |
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