Gene
| Gene Model ID | pfu_aug2.0_868.1_27861 |
|---|---|
| Locus | scaffold868.1 : 90116 ... 95219 : + |
| To GenomeBrowser | scaffold868.1:90116..95219 |
| Genes list of scaffold | scaffold868.1 |
| Synonym | pfu_aug1.0_205325.1_57455 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_868.1_27861.t1 | 1 | 1 | TPD52 | 131 | 252 | 4.4e-17 | 62.2 | 6.3e-21 | 9.4e-17 | 61.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_868.1_27861.t1 | gi|524916381|ref|XP_005112969.1| | PREDICTED: tumor protein D54-like [Aplysia californica] | 2.0e-15 |
| pfu_aug2.0_868.1_27861.t1 | gi|602672726|ref|XP_007441864.1| | PREDICTED: tumor protein D52 isoform X2 [Python bivittatus] | 1.0e-13 |
| pfu_aug2.0_868.1_27861.t1 | gi|676484163|ref|XP_009063258.1| | hypothetical protein LOTGIDRAFT_235604 [Lottia gigantea] | 2.0e-13 |
| pfu_aug2.0_868.1_27861.t1 | gi|734639050|ref|XP_010748292.1| | PREDICTED: tumor protein D54-like isoform X5 [Larimichthys crocea] | 1.0e-12 |
| pfu_aug2.0_868.1_27861.t1 | gi|532037971|ref|XP_005361859.1| | PREDICTED: tumor protein D52 isoform X7 [Microtus ochrogaster] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_868.1_27861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27861.t1 atgagtgccaaaaagaaaccgcaaaacacgcggtctaaacagaaggccccggtccaaaacgagggcgaaaatttcgacga aacggaatataaactgaaaatgagtgaacattcaaattatctgaaatttttgaaaatgactgacgaagcggtagcatccg atgacgaatacccacaaaatggtgacgtagaaggatttatagaggatgacatcataggcgatatgttaccctcagaatgt gatatgcacgacgaatcagatctgactgaagcagaggaggaaaaacaggcagatggaggattggaaaggggaataagcca ggaagcactggaaaacataaaacatgatgaagaaaaggaaaggagtaattataaggtacaaagtgattgtaaagataaga gagatagttgtaaaattgtaaattgtgagaggctcggggagaaggatacagatagaagggagataagaggcgtggcctgg gttgaaagtgaaattcagacactcagacaggtgctaggttccaaggtgcgatacgcttccgaactcaaacggaaaatggg cattactccgttccaagagctgaaacaagatattcagataggaatcaagtccatacaaagctctggggcattctatggaa atggtcagaaaactctgggaaatgaaggtgcaaaatccatgttatcatacgattttcgtgacgtcataatggttttacgt cagaaactgtctcaaatgggaaataattctgtattctgcaaagactcaacatcaaactga |
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Protein
| Protein ID | pfu_aug2.0_868.1_27861.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_868.1_27861.t1 MSAKKKPQNTRSKQKAPVQNEGENFDETEYKLKMSEHSNYLKFLKMTDEAVASDDEYPQNGDVEGFIEDDIIGDMLPSEC DMHDESDLTEAEEEKQADGGLERGISQEALENIKHDEEKERSNYKVQSDCKDKRDSCKIVNCERLGEKDTDRREIRGVAW VESEIQTLRQVLGSKVRYASELKRKMGITPFQELKQDIQIGIKSIQSSGAFYGNGQKTLGNEGAKSMLSYDFRDVIMVLR QKLSQMGNNSVFCKDSTSN |
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